DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc5a1 and CG31262

DIOPT Version :9

Sequence 1:NP_062784.3 Gene:Slc5a1 / 20537 MGIID:107678 Length:665 Species:Mus musculus
Sequence 2:NP_001138069.2 Gene:CG31262 / 318649 FlyBaseID:FBgn0051262 Length:579 Species:Drosophila melanogaster


Alignment Length:622 Identity:123/622 - (19%)
Similarity:233/622 - (37%) Gaps:141/622 - (22%)


- Green bases have known domain annotations that are detailed below.


Mouse    29 ISVIVIYFVVVMAVGLWAMFS------------------TNRGT--VGGFFLAGRSMVWWPIGAS 73
            :..:|:..:.:::.|....|.                  ||.|:  :..:.:..|:|...|:..:
  Fly     9 VDYLVLVAMTLLSTGTGIYFGALKKKHKNKKSVSEDNRRTNFGSEKIDEYLMGSRNMKVIPVSIT 73

Mouse    74 LFASNIGSGHFVGLAGTGAAAGIAMGGFEWNALVLVVVL-----GWIFVPIYIKAGVVTMPEYLR 133
            |:       ....:.||  .:.|...|.::..:::.::|     .::::|:|....:.:..||| 
  Fly    74 LY-------RVTSIIGT--PSEIYHYGTQYYLIIVAIILQGIAFSYVYLPVYSALQIGSAYEYL- 128

Mouse   134 KRFGGKRIQIYLSVLSLLLYIF---TKISADIFSGAIFINLALGLDIYLAIFILLAITALYTITG 195
                |.|....:...:..:|:|   |.:...::..|:.::...||:.:|...:::.....||..|
  Fly   129 ----GLRFNSIIRTTASFMYVFGILTYLPFIVYVPALSLSQVSGLNTHLIGLVIILACVTYTFMG 189

Mouse   196 GLAAVIYTDTLQTAIMLVGSFILTGFAFNEVGGYEAFMDKYMKAIPTKVSNGNFTAKEECYTPRA 260
            ||.||::||..|.|:|.:....:...|.....|..|..|...:.....::|.|            
  Fly   190 GLKAVVHTDVWQVAVMFLSLVAVAFLAIYYSNGLVAVFDDAEQGGRLMLANTN------------ 242

Mouse   261 DSFHIFRDPITGDMPWPGLIFGLAILALWYWCT----DQVIVQRCLSAKNMSH-----------V 310
                  ..|......|..||.|.:     :|.:    .|.:|||.:|..::..           |
  Fly   243 ------PSPYVRHTVWSVLIGGFS-----FWTSVNAGGQHMVQRYMSLPSLKKSRQASFIFTIGV 296

Mouse   311 KAGCTLCGYLKLLPMFLMVMPGMISRILYTEKIACVLPEECQKYCGTPVGCTNIAYPTLVVELMP 375
            .....||.::.||              |:::.      ::|.......:...:...|..||:.:.
  Fly   297 SIFIALCCFMGLL--------------LFSKY------KDCDPRSAGMILNDDQLLPLFVVQSVG 341

Mouse   376 N--GLRGLMLSVMMASLMSSLTSIFNSASTLFTMDIYTKIRK-KASEKELMIAGRLFILVLIGIS 437
            :  |:.||.::.:..:.:|||:|.||:.|.:|..||.....| :.||::..|..:..|:....::
  Fly   342 HIYGMPGLFIAGIFGAGLSSLSSCFNTVSMVFLEDIVRGFFKMEPSERQSTILIKTCIIFQGILA 406

Mouse   438 IAWVPIVQSAQSGQLFDYIQSITSYLGPPIAAVFLLAIFCKRVNEQG-AFWGLILGFLIGISRMI 501
            ...|.::|..:.  :.....||:|........||.|.:.....|..| |..||....|.|.....
  Fly   407 FLIVFLLQHLRG--ILSVCNSISSITAGTSFGVFTLGMLFPWANTIGTAVGGLSSVLLAGWISFG 469

Mouse   502 TEFAYGTG---SCMEPSNCPKIICGV-------------------HYLYFAIILFVISVITILII 544
            ::.|..:|   |.|.|.:..:.:..|                   .|.:.:.|..|.:|:...::
  Fly   470 SQIAAASGQLKSGMLPVSVKECVGNVTLPEDPWVDQDQVFPLYRLSYHWVSPIGVVTAVVVGALV 534

Mouse   545 SFLTKPI-----------PDVH--LYRLCWSLRNSKE 568
            |.:|||.           |.:|  |.|.|:..||..|
  Fly   535 SLITKPADIKTLHAELISPVIHRFLPRECFRGRNLNE 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc5a1NP_062784.3 SLC5-6-like_sbd 27..665 CDD:294310 123/622 (20%)
CG31262NP_001138069.2 SLC5sbd_NIS-SMVT 9..522 CDD:271383 108/571 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836551
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0591
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243316at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

Return to query results.
Submit another query.