DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a12 and Orct

DIOPT Version :9

Sequence 1:NP_033229.3 Gene:Slc22a12 / 20521 MGIID:1195269 Length:553 Species:Mus musculus
Sequence 2:NP_001262908.1 Gene:Orct / 42891 FlyBaseID:FBgn0019952 Length:548 Species:Drosophila melanogaster


Alignment Length:563 Identity:157/563 - (27%)
Similarity:263/563 - (46%) Gaps:50/563 - (8%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MAFPELLDRVGGLGRFQLFQTVALVTPILWVTTQNMLENFSAAVPHHRCWVPLLDNSTSQASIPG 65
            |.:.:::..:|..|.:|......|..|.:......:...|..|.|..||.:|..:.|..:.|   
  Fly     1 MGYDDVITHLGEFGPYQKRIYYLLCLPAIVCAFHKLAGVFLLAKPDFRCALPYENGSIYELS--- 62

Mouse    66 DLGPDVLLAVSIPPGPDQQPHQCLRFRQPQWQLTESNATATNWSDA----------------ATE 114
                               ||        .|.|:.......::.|.                .|:
  Fly    63 -------------------PH--------LWNLSYPENERCSYYDVDYTEEYLNGSIPRSSNETK 100

Mouse   115 PCEDGWVYDHSTFRSTIVTTWDLVCNSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLTWS 179
            .| ..:|||.|.:.::.||.|:|||:...|...:.|:|:.|:|:|:.:.|..||:.||:.....|
  Fly   101 TC-SSYVYDRSKYLNSAVTEWNLVCSRSLLSATSDSLFMLGVLLGSLIFGQMSDKLGRKPTFFAS 164

Mouse   180 YLLVSVSGTAAAFMPTFPLYCLFRFLLASAVAGVMMNTASLLMEWTSAQGSPLVMTLNALGFSFG 244
            .:|..:.|..||..|.:..|.:.|.::.:..:||.:....:.:|...:...........:.||.|
  Fly   165 LVLQLIFGVLAAVAPEYFSYTISRMIVGATTSGVFLVAYVIALEMVGSSYRLFAGVAMQMFFSVG 229

Mouse   245 QVLTGSVAYGVRSWRMLQLAVSAPFFLFFVYSWWLPESARWLITVGKLDQGLQELQRVAAVNRRK 309
            .:||...||.:..||.||:|::.|..||..|.|.:|||||||:..|:.|:....:::.|..|:.:
  Fly   230 FMLTAGFAYFIHDWRWLQIAITLPGLLFLCYYWIIPESARWLLMKGRKDEAFVIIEKAAKENKVE 294

Mouse   310 AEG---DTLTMEVLRSAMEEEPSRDKAGASLGTLLHTPGLRHRTIISMLCWFAFGFTFYGLALDL 371
            ...   :.|..||.....::|.:..:..|::..||..|.||.:|::....||.....:|||:.:.
  Fly   295 VPNEIYEQLVDEVAEKKKQDEMAASQPAATVFDLLRYPNLRRKTLLIFFDWFVNSGVYYGLSWNT 359

Mouse   372 QALGSNIFLLQALIGIVDFPVKTGSLLLISRLGRRLCQVSFLVLPGLCILSNILVPHGMGVLRSA 436
            ..||.|..:...:.|.|:.|..|..|..::|.|||......:::.|:.:|:.|.||..|..|..|
  Fly   360 NNLGGNQLVNFMISGAVEIPGYTLLLFTLNRWGRRSILCGTMMVAGISLLATIFVPSDMNWLIVA 424

Mouse   437 LAVLGLGCLGGAFTCITIFSSELFPTVIRMTAVGLCQVAARGGAMLGPLVRLLGVYGSWMPLLVY 501
            .|::|...:..::..|.|||:|.||||:|...:|...:.||.|.:|.|.::|||.....:||::.
  Fly   425 CAMIGKLAITSSYGTIYIFSAEQFPTVVRNVGLGASSMVARVGGILAPYLKLLGEIWRPLPLIIC 489

Mouse   502 GVVPVLSGLAALLLPETKNLPLPDTIQDIQKQSVKKVTHDTPD 544
            |.:.:.:||.:||||||.|.|:|:||:|.:....|....:|.:
  Fly   490 GALSLTAGLLSLLLPETLNKPMPETIEDGENFGKKPAPQETAE 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a12NP_033229.3 2A0119 11..526 CDD:273328 151/533 (28%)
MFS 147..516 CDD:119392 113/371 (30%)
OrctNP_001262908.1 2A0119 11..514 CDD:273328 151/533 (28%)
MFS 135..491 CDD:119392 108/355 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843313
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1933
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.980

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