DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a12 and CG4630

DIOPT Version :9

Sequence 1:NP_033229.3 Gene:Slc22a12 / 20521 MGIID:1195269 Length:553 Species:Mus musculus
Sequence 2:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster


Alignment Length:577 Identity:159/577 - (27%)
Similarity:269/577 - (46%) Gaps:65/577 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse     3 FPELLDRVGGLGRFQLFQTVALVTPILWVTTQNMLENFSAAVPHHRCWVPLLDNSTSQASIPGDL 67
            |.::|..:|..||||....:.:..|:|:....::...|:|..|.:||:||..|.     .:..:.
  Fly    15 FDDILVEIGEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGSPTYRCYVPECDK-----LVDAEY 74

Mouse    68 GPDVLLAVSIPPGPDQQ----PHQCLRFRQPQWQLTESNATATNWS---------DAATEPCEDG 119
            |.: .:::::|....::    |..|.||......|..|:...:.|.         ...||.|.. 
  Fly    75 GAN-WVSIAVPGSWSKRGHFTPSTCERFVANGDHLESSSDPWSAWPLDQCFAENFTTETERCNQ- 137

Mouse   120 WVYDHSTFRSTIVTTWDLVCNSQALR-PMAQSIFLAGILVGAAVCGHASDRFGRRRVLTWSYLLV 183
            :||..|  ..|||..|.|.|.....: ....:|..||::||.|:.|:.:||:||:.:..:..:.:
  Fly   138 FVYGSS--ERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLADRYGRKHIFLFCIVFM 200

Mouse   184 SVSGTAAAFMPTFPLYCLFRFLLASAVAGVMMNTASLLMEWTSAQGSPLVMTLNALGFSFGQVLT 248
            :::|.|.|....:..:..|..|.|...:||......:.:|....:...:...:....::.|:.|.
  Fly   201 ALTGVAQALSWDYISFLFFALLNAVGTSGVYPLAFIIGVEMVGPRKREMSSIVLNYFYAVGEALL 265

Mouse   249 GSVAYGVRSWRMLQLAVSAPFFLFFVYSWWLPESARWLITVGKLDQGLQELQRVAAVNRRKAEGD 313
            |...: :..||.||||:|.|..:...|.|.:|||.|||:...:.:|....::|.|.||||     
  Fly   266 GLSVF-LPDWRQLQLALSVPPLICVAYFWLVPESVRWLLARNRREQAGVIIRRAAKVNRR----- 324

Mouse   314 TLTMEVLRSAMEEE-----------------PSRDKAGASLGTLLHTPGLRHRTIISMLCWFAFG 361
            .:::|::.|..::|                 ...||...::..:..:..|..|..|.:|.|....
  Fly   325 DISVELMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHILMGRYAILLLIWAVNA 389

Mouse   362 FTFYGLALDLQALGSNIFLLQALIGIVDFPVKTGSLLLISRLGRRLCQVSFLVLPGL-CILSNIL 425
            ..:|||:|:..:|..|.:|..||:.:|:.|..:.:.|.:.|.|||:.....|:|..: |:.|..:
  Fly   390 IVYYGLSLNATSLSGNKYLNFALVCLVEIPGYSLAWLFLRRFGRRVALSGSLLLCSITCVASGFV 454

Mouse   426 -------VPHGMGV-----------LRSALAVLGLGCLGGAFTCITIFSSELFPTVIRMTAVGLC 472
                   :|...||           |...|.::|...:..:|..|..|::|:.|||||...||:.
  Fly   455 TLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVIYTFTAEMMPTVIRSGGVGVM 519

Mouse   473 QVAARGGAMLGPLVRLLGVYGSWMPLLVYGVVPVLSGLAALLLPETKNLPLPDTIQD 529
            ...||.||||.|.|.||..|...:|||::|.:.:::||.:||||||.|..||||:::
  Fly   520 STFARFGAMLAPFVPLLASYYDPLPLLLFGTLSLVAGLLSLLLPETFNRKLPDTVEE 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a12NP_033229.3 2A0119 11..526 CDD:273328 155/564 (27%)
MFS 147..516 CDD:119392 112/404 (28%)
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 155/564 (27%)
MFS 158..533 CDD:119392 100/380 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843320
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 1 1.010 - - D386678at33208
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.960

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