DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a2 and CarT

DIOPT Version :9

Sequence 1:NP_038695.1 Gene:Slc22a2 / 20518 MGIID:1335072 Length:553 Species:Mus musculus
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:557 Identity:175/557 - (31%)
Similarity:285/557 - (51%) Gaps:54/557 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 VDDILEHIGEFHLFQKQTFFLLALLS------GAFTPIYVGIVFLGFTPNHH-CRSPGVAE--LS 59
            :||:|..||||..:||...|.:.|.:      .||..:     |:..||:.: ||.|.:.:  |.
  Fly    36 LDDLLPTIGEFGKYQKLLVFGICLPACIPCGFCAFNQL-----FMADTPDDYWCRIPELLDLPLE 95

Mouse    60 QRCGWSPAEELNYTVPGLGSAGEVSFLSQCMRYEVDWNQSTLDC--VDPLSSLAANRSHLPLSPC 122
            ||...|..:||:         .:....|:|..|.|:|.| .|:.  .|.|:::..|.| .||..|
  Fly    96 QRKSLSIPKELD---------NDELVYSKCYTYGVNWTQ-LLESGEEDDLTTMEPNAS-WPLIKC 149

Mouse   123 EHGWVYDTP--GSSIVTEFNLVCAHSWMLDLFQSL----VNVGFFIGAVGIGYLADRFGRK---F 178
            ..||.|:|.  .||||.:|:|||..    |::.::    :|.|..:|....|.|.||.||:   |
  Fly   150 PQGWEYNTSVVWSSIVIDFDLVCDQ----DIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYF 210

Mouse   179 CLLVTILINAISGVLM-AISPNYAWMLVFRFLQGLVSKAGWLIGYILITEFVGLGYRRTVGICYQ 242
            ..|.|:|    :|.|| ::|.::......|.:.||...|.:.|.:|:..|.||..||..|.:...
  Fly   211 VCLATLL----AGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTC 271

Mouse   243 IAFTVGLLILAGVAYALPNWRWLQFAVTLPNFCFLLYFWCIPESPRWLISQNKNAKAMKIIKHIA 307
            ..:|.|:::|:||.|...:|..|.:..:||.:.:.||.:.:|||||||:.:.:..:|:||::.:|
  Fly   272 TFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMA 336

Mouse   308 KKNGKSVPVSLQ-----SLTADEDTGMK---LNPSFLDLVRTPQIRKHTLILMYNWFTSSVLYQG 364
            |.||:..|.::.     .:..|:....|   .|....||.|||.:|..|:::..:||.:..:|.|
  Fly   337 KVNGREFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLG 401

Mouse   365 LIMHMGLAGDNIYLDFFYSALVEFPAAFIIILTIDRIGRRYPWAVSNMVAGAACLASVFIPDDLQ 429
            |..:....|.|.|:.||.||:||.|:.......:|..|||:|.::|.::.|.||:.:|.:|||..
  Fly   402 LSYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDDAV 466

Mouse   430 WLKITVACLGRMGITIAYEMVCLVNAELYPTYIRNLAVLVCSSMCDIGGIVTPFLVYRLTDIWLE 494
            ...:.:..:.:..::.::.::.....|||||.:|.:.:...|.:..:|.|..||:.|...|. |:
  Fly   467 DETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITYLGKDN-LK 530

Mouse   495 FPLVVFAVVGLVAGGLVLLLPETKGKALPETIEDAEK 531
            .|||:...:.::.|...|.||||....||:|||:.|:
  Fly   531 LPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEE 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a2NP_038695.1 2A0119 12..525 CDD:273328 167/541 (31%)
MFS 125..492 CDD:119392 120/384 (31%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 167/541 (31%)
MFS 182..551 CDD:119392 113/373 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.920

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