DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Slc22a1 and CarT

DIOPT Version :9

Sequence 1:NP_033228.2 Gene:Slc22a1 / 20517 MGIID:108111 Length:556 Species:Mus musculus
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:564 Identity:181/564 - (32%)
Similarity:288/564 - (51%) Gaps:62/564 - (10%)


- Green bases have known domain annotations that are detailed below.


Mouse     4 VDDVLEHVGEFGWFQKQAFLLLCLISASLAPIYVGI-----VFLGFTPDHH-CRSPGVAE--LSQ 60
            :||:|..:||||.:||.....:||    .|.|..|.     :|:..|||.: ||.|.:.:  |.|
  Fly    36 LDDLLPTIGEFGKYQKLLVFGICL----PACIPCGFCAFNQLFMADTPDDYWCRIPELLDLPLEQ 96

Mouse    61 RCGWSPAEELNYTVPGLGSAGEASFLSQCMKYEVDWNQSTLDC--VDPLSSLAANRSHLPLSPCE 123
            |...|..:||:         .:....|:|..|.|:|.| .|:.  .|.|:::..|.| .||..|.
  Fly    97 RKSLSIPKELD---------NDELVYSKCYTYGVNWTQ-LLESGEEDDLTTMEPNAS-WPLIKCP 150

Mouse   124 HGWVYDTP--GSSIVTEFNLVCGDAWKVDLFQSCVNLGFFLGSLVVGYIADRFGRKLCLLVTTLV 186
            .||.|:|.  .||||.:|:|||.......:..:.:|.|..:|..:.|.:.||.||:|...| .|.
  Fly   151 QGWEYNTSVVWSSIVIDFDLVCDQDIYPTIGLAALNTGGPVGVYLFGLLNDRGGRRLSYFV-CLA 214

Mouse   187 TSLSG-VLTAVAPDYTSMLLFRLLQGMVSKGSWVSGYTLITEFVGSGYRRTTAILYQVAFTVGLV 250
            |.|:| ::|:::.|:.:....|::.|:.....:...:.:..|.||..||....::....:|.|::
  Fly   215 TLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFVTVMTCTFYTSGIM 279

Mouse   251 GLAGVAYAIPDWRWLQLAVSLPTFLFLLYYWFVPESPRWLLSQKRTTQAVRIMEQIAQKN-RKVP 314
            .|:||.|...||..|....|||.:.:.||.:.:||||||||.:.|..:|::|:|::|:.| |:.|
  Fly   280 LLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGRLEEALKILERMAKVNGREFP 344

Mouse   315 PA-DLKMMC------LEEDASERRSPSFADLFRTPSLRKHTLILMYLWFSCAVLYQGLIMHVGAT 372
            .| .||:..      |::...:..:...|||.|||::|..|:::...||:...:|.||..:..|.
  Fly   345 EAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLSWFANETVYLGLSYYGPAL 409

Mouse   373 GANLYLDFFYSSLVEFPAAFIILVTIDRIGRIYPIAASNLVAGAACLLMIFIPHELHWLNVTLAC 437
            |.|.|:.||.|::||.|:.......:|..||.:|::.|.::.|.||::.:.:|.:          
  Fly   410 GTNQYVSFFLSAVVELPSYLCCWYFMDTWGRRWPLSLSMILGGVACVITVMLPDD---------- 464

Mouse   438 LGRMGATIVLQMV--CLVNA----------ELYPTFIRNLGMMVCSALCDLGGIFTPFMVFRLME 490
              .:..|:||.:|  .|::|          |||||.:|.:|:...|.:..||.|..||:.: |.:
  Fly   465 --AVDETLVLYLVSKALLSASFLIIYPFAGELYPTQVRGIGIGASSYIGGLGLIGIPFITY-LGK 526

Mouse   491 VWQALPLILFGVLGLSAGAVTLLLPETKGVALPETIEEAENLGR 534
            ....|||::.|.|.:..|...|.||||....||:||||.|..|:
  Fly   527 DNLKLPLVIMGFLSMLGGMTGLRLPETLHHRLPQTIEEGEEFGK 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc22a1NP_033228.2 2A0119 12..525 CDD:273328 172/545 (32%)
MFS 125..515 CDD:119392 128/412 (31%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 172/545 (32%)
MFS 182..551 CDD:119392 116/382 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3B9N9
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG57756
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000012
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X24
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

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