DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc1a6 and Eaat2

DIOPT Version :9

Sequence 1:XP_006513485.3 Gene:Slc1a6 / 20513 MGIID:1096331 Length:602 Species:Mus musculus
Sequence 2:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster


Alignment Length:534 Identity:215/534 - (40%)
Similarity:314/534 - (58%) Gaps:62/534 - (11%)


- Green bases have known domain annotations that are detailed below.


Mouse    75 RRFLRRNAFILLTVSAVIIGVSLAFALRPYQLSYRQIKYFSFPGELLMRMLQMLVLPLIVSSLVT 139
            ||:|..|..:|:|:|.|::||.|..:|||..|....|...|:||||.||:|::::|||::|||:.
  Fly    43 RRWLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIA 107

Mouse   140 GMASLDNKATGRMGMRAAVYYMVTTVIAVFIGILMVTIIHPGKGSKEGLH----REGRIETVPTA 200
            |.|||:.|..|::.:|..||:..|:.....:||.:|.:||||   ...||    |......|...
  Fly   108 GSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPG---NPDLHNADDRSTDRRAVNLL 169

Mouse   201 DAFMDLVRNMFPPNLVEACFKQFKTQYSTRVVTRTIVRTDNGSELGASMSPTSS---VENETSIL 262
            |:.:||.||:||.||.:|..:|..|.|                      .|..|   |.|||.  
  Fly   170 DSLLDLGRNVFPDNLFQASIQQAHTVY----------------------LPKPSILHVFNETM-- 210

Mouse   263 ENVTRALGTLQEVISFEETVPVP-----GSANGINALGLVVFSVAFGLVIGGMKHKGRVLRDFFD 322
             |.|.|.|:..:.:|.:.|..|.     ...:|.|.||:|.|.:.||..:|.:..||:|:.|||.
  Fly   211 -NDTLASGSEAQRLSEDLTEDVVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFA 274

Mouse   323 SLNEAIMRLVGIIIWYAPVGILFLIAGKILEMEDMAVLGGQLGMYTLTVIVGLFLHAGGVLPLIY 387
            ::.|.||::|..::|..||||..:||||||.:.|:.::..||..:.:||.:|:|::...|:..||
  Fly   275 AIFEVIMKMVTCVMWLTPVGISSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIY 339

Mouse   388 FLVTHRNPFPFIGGMLQALITAMGTSSSSATLPITFRCLEEGLGVDRRITRFVLPVGATVNMDGT 452
            |:|..||||.|..|::||::||..|:|::|.|||||||:.|.|.||.||||||||:|..:|||||
  Fly   340 FVVVRRNPFKFYAGLIQAMLTAFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGT 404

Mouse   453 ALYEALAAIFIAQVNNYELNLGQITTISLSSRIPDSLPVCSITATAASVGAAGIPQAGLVTMVIV 517
            |||.|:|:|||||::...|..|::.|:.|             |:||||:.:|.:|.|.||.:::|
  Fly   405 ALYIAVASIFIAQMSGMVLGFGELLTVLL-------------TSTAASMSSASVPSAALVLLLVV 456

Mouse   518 LTSVGLPTEDITLIIAVDWFLDRLRTMTNVLGDSIGAAVIEHLSQRELELQEAELTLPSLGKPYK 582
            ||::..|.:|:||:.|||||:||:||..|:|||...|||:|.||::||      :.|.:....|:
  Fly   457 LTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDCYTAAVVEELSRKEL------MALDAASVNYQ 515

Mouse   583 SLMAQEKGASRGRG 596
            .:.|   |...|.|
  Fly   516 DMPA---GTPNGHG 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc1a6XP_006513485.3 SDF 83..560 CDD:366058 201/488 (41%)
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 199/485 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm42841
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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