DRSC/TRiP Functional Genomics Resources

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Protein Alignment Slc1a3 and Eaat2

DIOPT Version :9

Sequence 1:NP_683740.1 Gene:Slc1a3 / 20512 MGIID:99917 Length:543 Species:Mus musculus
Sequence 2:NP_001162844.1 Gene:Eaat2 / 33247 FlyBaseID:FBgn0026438 Length:579 Species:Drosophila melanogaster


Alignment Length:478 Identity:204/478 - (42%)
Similarity:312/478 - (65%) Gaps:15/478 - (3%)


- Green bases have known domain annotations that are detailed below.


Mouse    42 KSYLFRNAFVLLTVTAVIVGTILGFALRPYKMSYREVKYFSFPGELLMRMLQMLVLPLIISSLVT 106
            :.:|..|..:|:|::.|::|.|||.:|||..:....:...|:||||.||:|::::|||:||||:.
  Fly    43 RRWLSENLMLLVTLSGVLLGVILGLSLRPLNLHGDSIMLISYPGELFMRVLKLMILPLVISSLIA 107

Mouse   107 GMAALDSKASGKMGMRAVVYYMTTTIIAVVIGIIIVIIIHPGKGTKENM-YREGKIVQVTAADAF 170
            |.|:|::|.:||:.:|.:||:.:|:.....:||.:|::||||.....|. .|......|...|:.
  Fly   108 GSASLNAKMNGKIALRTLVYFASTSFFNAALGIALVLLIHPGNPDLHNADDRSTDRRAVNLLDSL 172

Mouse   171 LDLIRNMFPPNLVEACFKQFKTSYEKRSFKVPIQS-----NETLLGAVINNVSEAMETLTRIREE 230
            |||.||:||.||.:|..:|..|.|      :|..|     |||:...:.:. |||......:.|:
  Fly   173 LDLGRNVFPDNLFQASIQQAHTVY------LPKPSILHVFNETMNDTLASG-SEAQRLSEDLTED 230

Mouse   231 MVPVPGSV--NGVNALGLVVFSMCFGFVIGNMKEQGQALREFFDSLNEAIMRLVAVIMWYAPLGI 293
            :|.|....  :|.|.||:|.|.:.||..:|.:.::||.:.:||.::.|.||::|..:||..|:||
  Fly   231 VVLVRDIQYRSGTNTLGIVFFCLVFGTFLGTIGQKGQVVVDFFAAIFEVIMKMVTCVMWLTPVGI 295

Mouse   294 LFLIAGKIVEMEDMGVIGGQLAMYTVTVIVGLLIHAVIVLPLLYFLVTRKNPWVFIGGLLQALIT 358
            ..:|||||:.:.|:|::..||..:.|||.:|:.|:..:|:..:||:|.|:||:.|..||:||::|
  Fly   296 SSVIAGKILSVGDLGLVMSQLMWFIVTVAIGVFIYQFVVMQAIYFVVVRRNPFKFYAGLIQAMLT 360

Mouse   359 ALGTSSSSATLPITFKCLEENNGVDKRITRFVLPVGATINMDGTALYEALAAIFIAQVNNFDLNF 423
            |..|:|::|.|||||:|:.|...||.||||||||:|..|||||||||.|:|:|||||::...|.|
  Fly   361 AFATASTAAALPITFRCMNEKLKVDPRITRFVLPIGCNINMDGTALYIAVASIFIAQMSGMVLGF 425

Mouse   424 GQIITISITATAASIGAAGIPQAGLVTMVIVLTSVGLPTDDITLIIAVDWFLDRLRTTTNVLGDS 488
            |:::|:.:|:||||:.:|.:|.|.||.:::|||::..|..|:||:.|||||:||:|||.|:|||.
  Fly   426 GELLTVLLTSTAASMSSASVPSAALVLLLVVLTAIDAPVQDVTLLFAVDWFVDRIRTTNNMLGDC 490

Mouse   489 LGAGIVEHLSRHELKNRDVEMGN 511
            ..|.:||.|||.||...|....|
  Fly   491 YTAAVVEELSRKELMALDAASVN 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Slc1a3NP_683740.1 SDF 50..497 CDD:278787 195/454 (43%)
Aspartate binding. /evidence=ECO:0000250|UniProtKB:O59010 363..365 0/1 (0%)
Aspartate binding. /evidence=ECO:0000250|UniProtKB:P43003 443..447 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 522..543
Eaat2NP_001162844.1 SDF 51..496 CDD:278787 193/451 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1301
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62336
OrthoDB 1 1.010 - - D1184392at2759
OrthoFinder 1 1.000 - - FOG0000144
OrthoInspector 1 1.000 - - otm42841
orthoMCL 1 0.900 - - OOG6_100309
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X191
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.730

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