DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EPHB4 and CDC15

DIOPT Version :9

Sequence 1:XP_016867305.1 Gene:EPHB4 / 2050 HGNCID:3395 Length:1005 Species:Homo sapiens
Sequence 2:NP_009411.2 Gene:CDC15 / 851274 SGDID:S000000072 Length:974 Species:Saccharomyces cerevisiae


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EPHB4XP_016867305.1 EphR_LBD_B4 17..196 CDD:198442
FN3 324..429 CDD:238020
FN3 452..544 CDD:238020
EphA2_TM <582..628 CDD:291255
PTKc_EphR_B 628..896 CDD:173638
Pkinase_Tyr 633..892 CDD:285015
SAM 922..989 CDD:197735
SAM_EPH-B4 925..991 CDD:188953
CDC15NP_009411.2 PKc_like 24..272 CDD:419665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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