Sequence 1: | NP_033219.1 | Gene: | Slbp / 20492 | MGIID: | 108402 | Length: | 275 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477480.1 | Gene: | Slbp / 43448 | FlyBaseID: | FBgn0041186 | Length: | 276 | Species: | Drosophila melanogaster |
Alignment Length: | 225 | Identity: | 74/225 - (32%) |
---|---|---|---|
Similarity: | 109/225 - (48%) | Gaps: | 43/225 - (19%) |
- Green bases have known domain annotations that are detailed below.
Mouse 11 YGSRRDGGASPRSPAR--WSLGRKRRADGRDRKPEDSE----------------------EGELQ 51
Mouse 52 TADHRPESFTTPEGHKPRSRC---------SDWASAVEEDEMRTRVNKEIARYKRKLLINDFGRE 107
Mouse 108 RKSSSGSSDSKESMSSVPADVETDESVLMRRQKQINYGKNTIAYDRYIKEVPRHLRQPGIHPRTP 172
Mouse 173 NKFKKYSRRSWDQQIKLWKVALHFWDPPAE 202 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Slbp | NP_033219.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..88 | 24/109 (22%) | |
Nuclear localization signal NLS1. /evidence=ECO:0000250 | 31..34 | 1/2 (50%) | |||
Nuclear localization signal NLS2. /evidence=ECO:0000250 | 96..99 | 0/2 (0%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 103..133 | 9/29 (31%) | |||
RNA-binding. /evidence=ECO:0000250 | 129..198 | 38/68 (56%) | |||
SLBP_RNA_bind | 130..197 | CDD:373680 | 37/66 (56%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 219..240 | ||||
Slbp | NP_477480.1 | SLBP_RNA_bind | 191..256 | CDD:291900 | 23/48 (48%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167847427 | |
Domainoid | 1 | 1.000 | 89 | 1.000 | Domainoid score | I7859 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3934 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 102 | 1.000 | Inparanoid score | I4953 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0003353 | |
OrthoInspector | 1 | 1.000 | - | - | oto94285 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103940 | |
Panther | 1 | 1.100 | - | - | O | PTHR17408 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2795 |
SonicParanoid | 1 | 1.000 | - | - | X2243 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.870 |