DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment EPHB1 and ephb1

DIOPT Version :9

Sequence 1:NP_004432.1 Gene:EPHB1 / 2047 HGNCID:3392 Length:984 Species:Homo sapiens
Sequence 2:XP_002935121.2 Gene:ephb1 / 493336 XenbaseID:XB-GENE-488626 Length:987 Species:Xenopus tropicalis


Alignment Length:987 Identity:898/987 - (90%)
Similarity:937/987 - (94%) Gaps:3/987 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MALDYLLLLLL---ASAVAAMEETLMDTRTATAELGWTANPASGWEEVSGYDENLNTIRTYQVCN 62
            |.|:.||||||   .|.|.|:||||||||||||||||||||:|||||||||||||||||||||||
 Frog     1 MELNVLLLLLLCSIGSQVGAVEETLMDTRTATAELGWTANPSSGWEEVSGYDENLNTIRTYQVCN 65

Human    63 VFEPNQNNWLLTTFINRRGAHRIYTEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSVIATKKSA 127
            ||.|:||||||||||.||||||:|.||||||||||||||||||||||||||||||||.|..|.|.
 Frog    66 VFGPSQNNWLLTTFIPRRGAHRVYVEMRFTVRDCSSLPNVPGSCKETFNLYYYETDSNIDNKIST 130

Human   128 FWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYGACMSLLSVRVF 192
            ||:|:||||||||||||||||||||||||||||||||||||||:|||||||||||||||||||||
 Frog   131 FWNESPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRSGFYLAFQDYGACMSLLSVRVF 195

Human   193 FKKCPSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEEVDVPIKLYCNGDGEWMVPIGRCTCKP 257
            ||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||:||||.
 Frog   196 FKKCPSVVQNFAVFPETMTGAESTSLVIARGTCIPNAEEVDVPIKLYCNGDGEWMVPIGKCTCKA 260

Human   258 GYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICTCRTGYYRADFDPPEVACTSV 322
            ||||||.|.||||||..|||:|....|:.||:||||.:||||||.||.||||||||.||..||||
 Frog   261 GYEPENHVVCKACPAAMFKANQGMGVCAPCPANSRSTSEASPICICRNGYYRADFDTPEAPCTSV 325

Human   323 PSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIICKKCRADRRSCSRCDDNVEFVPRQLGLT 387
            ||||||||||||||:|.||||||||||||||||||||||||::|||.||||||||||||||:|||
 Frog   326 PSGPRNVISIVNETAITLEWHPPRETGGRDDVTYNIICKKCQSDRRGCSRCDDNVEFVPRQMGLT 390

Human   388 ECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQAAPSTVPIMHQVSATMRSITL 452
            :.||.||:|||||||||:|||||||::|||||||||||||||||||||:|||||||.|||:||||
 Frog   391 DTRVFISNLWAHTPYTFEIQAINGVTNKSPFPPQHVSVNITTNQAAPSSVPIMHQVKATMKSITL 455

Human   453 SWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLRPGMVYVVQVRARTVAGYGKF 517
            ||||||||||||||||||||||:|:|||||:||||||||.|:|||||:|||||||||||||||||
 Frog   456 SWPQPEQPNGIILDYEIRYYEKDHHEFNSSLARSQTNTASIEGLRPGVVYVVQVRARTVAGYGKF 520

Human   518 SGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIVCSRKRAYSKEAVYSDKLQHY 582
            |.||||||||.:|||||||||||||||||||||||:||||||||||||||.||||||||||||||
 Frog   521 SSKMCFQTLTAEDYKSELREQLPLIAGSAAAGVVFIVSLVAISIVCSRKRTYSKEAVYSDKLQHY 585

Human   583 STGRGSPGMKIYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPGKREIY 647
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|||||
 Frog   586 STGRGSPGMKIYIDPFTYEDPNEAVREFAKEIDVSFVKIEEVIGAGEFGEVYKGRLKLPSKREIY 650

Human   648 VAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQN 712
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   651 VAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSRPVMIITEFMENGALDSFLRQN 715

Human   713 DGQFTVIQLVGMLRGIAAGMKYLAEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPT 777
            |||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||
 Frog   716 DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRYLQDDTSDPT 780

Human   778 YTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSFGERPYWDMSNQDVINAIEQDYR 842
            ||||||||||||||||||||||||||||||||||||||||||:||||||||||||||||||||||
 Frog   781 YTSSLGGKIPVRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYR 845

Human   843 LPPPMDCPAALHQLMLDCWQKDRNSRPRFAEIVNTLDKMIRNPASLKTVATITAVPSQPLLDRSI 907
            |||||||||||||||||||||||||||||.||||||||||||||||||||||.|||||||||.||
 Frog   846 LPPPMDCPAALHQLMLDCWQKDRNSRPRFGEIVNTLDKMIRNPASLKTVATIPAVPSQPLLDHSI 910

Human   908 PDFTAFTTVDDWLSAIKMVQYRDSFLTAGFTSLQLVTQMTSEDLLRIGITLAGHQKKILNSIHSM 972
            ||.||||:||||||||||.||||.||::||||||||.|||||||||||||||||||||||||.||
 Frog   911 PDITAFTSVDDWLSAIKMGQYRDIFLSSGFTSLQLVAQMTSEDLLRIGITLAGHQKKILNSIQSM 975

Human   973 RVQISQSPTAMA 984
            |||||||||::|
 Frog   976 RVQISQSPTSIA 987

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EPHB1NP_004432.1 EphR_LBD_B1 20..195 CDD:198444 160/174 (92%)
FN3 323..429 CDD:238020 92/105 (88%)
fn3 435..518 CDD:278470 73/82 (89%)
EphA2_TM 546..614 CDD:291255 65/67 (97%)
PTKc_EphR_B 614..882 CDD:173638 263/267 (99%)
Pkinase_Tyr 619..878 CDD:285015 254/258 (98%)
SAM_EPH-B1 908..975 CDD:188950 58/66 (88%)
SAM 908..973 CDD:197735 56/64 (88%)
PDZ-binding. /evidence=ECO:0000255 982..984 0/1 (0%)
ephb1XP_002935121.2 EphR_LBD_B1 23..198 CDD:198444 160/174 (92%)
FN3 326..432 CDD:238020 92/105 (88%)
FN3 420..528 CDD:238020 97/107 (91%)
EphA2_TM 549..617 CDD:373140 65/67 (97%)
PTKc_EphR_B 617..885 CDD:173638 263/267 (99%)
SAM_EPH-B1 911..978 CDD:188950 58/66 (88%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 520 1.000 Domainoid score I3426
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H20936
Inparanoid 1 1.050 1829 1.000 Inparanoid score I867
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D33462at32523
OrthoFinder 1 1.000 - - FOG0000086
OrthoInspector 1 1.000 - - oto150081
Panther 1 1.100 - - LDO PTHR24416
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X82
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.160

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