DRSC/TRiP Functional Genomics Resources

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Protein Alignment EPHB1 and Ddr

DIOPT Version :10

Sequence 1:NP_004432.1 Gene:EPHB1 / 2047 HGNCID:3392 Length:984 Species:Homo sapiens
Sequence 2:NP_001014474.3 Gene:Ddr / 3346209 FlyBaseID:FBgn0053531 Length:1054 Species:Drosophila melanogaster


Alignment Length:794 Identity:186/794 - (23%)
Similarity:297/794 - (37%) Gaps:242/794 - (30%)


- Green bases have known domain annotations that are detailed below.


Human   117 TDSVIATKKSAFWSEAPYLKVDTIAADESFSQVDFGGRLMKVNTEVRSFGPLTRNGFYLAFQDYG 181
            ||.:...:|.:..||.|      :..||....:..||...:..|:|.|..|:.......:|  .|
  Fly   447 TDELANGEKQSVTSEYP------LQRDEVGRAISSGGERSQHTTQVISPKPIDHQEPETSF--VG 503

Human   182 ACMSLLSVRVFFKKCPSIVQNFAVFPETMTGAESTSLVIARGTCIPNAEE-VDV------PIKLY 239
            ..:::|.         :|:.....|         ..|::||...:.:.|. :|.      |..| 
  Fly   504 VIITVLG---------TIIMLLVAF---------ILLIVARNKHVRSRENGLDAFQHNFSPDTL- 549

Human   240 CNGDGEWMVPIGRCTCKPGYEPENSVACKACPAGTFKASQEAEGCSHCPSNSRSPAEASPICTCR 304
             ||:|...|    .|...  :.|:|:...:.....|.|:......|.||.|.......||..|  
  Fly   550 -NGNGVLKV----VTTMD--DNESSIDKNSLYHEPFNANMYTSAASACPMNDLQRQHVSPDYT-- 605

Human   305 TGYYRADFDPPEVACT--SVPSGPRNVISIVNETSIILEWHPPRETGGRDDVTYNIICKKCRADR 367
                    |.|::.|.  :||           ....:|...||..:|             |....
  Fly   606 --------DVPDIVCQDYAVP-----------HMQQLLPNAPPCGSG-------------CGTGT 638

Human   368 RSCSRCDDNVEFVPRQLGLTECRVSISSLWAHTPYTFDIQAINGVSSKSPFPPQHVSVNITTNQA 432
            .:......:.|||     :...:|:.|:.          .::|..:...|.||            
  Fly   639 GTGPGRGSSPEFV-----VATGKVTASAR----------NSLNAATLPLPSPP------------ 676

Human   433 APSTVPIMHQVSATMRSITLSWPQPEQPNGIILDYEIRYYEKEHNEFNSSMARSQTNTARIDGLR 497
            .|.  |:....:||..|   |.|.|..|.|                ..||.:.|.:.||      
  Fly   677 VPP--PLEKYYAATPVS---SKPMPVAPPG----------------SQSSGSLSSSTTA------ 714

Human   498 PGMVYVVQVRARTVAGYGKFSGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIV 562
                                                         |.:..:|||.|         
  Fly   715 ---------------------------------------------ATTPTSGVVGV--------- 725

Human   563 CSRKRAYSKEAVYSDKLQHYSTGRGSPGMKIYIDPFTYEDPNE-----AVREFAKEIDVSFVKIE 622
                          .|..||:....:          .:.|.||     .|:||.::   |.|.:|
  Fly   726 --------------GKPHHYNLDMSA----------NFADINEERANCQVQEFPRQ---SLVIVE 763

Human   623 EVIGAGEFGEVYKGRLKLPGKREIYVAIKTLKAGYSEKQRRDFLSEASIMGQFDHPNIIRLEGVV 687
            : :|:|.|||::.....:  .....||:.||:.|.::..|::|.|:|..:.|...||:.||.|..
  Fly   764 K-LGSGVFGELHLCETNV--LNATLVAVATLRPGANDHLRKEFRSKAKQLAQLSDPNVARLVGAC 825

Human   688 TKSRPVMIITEFME-NGALDSFLRQNDGQFTVIQ---------LVGMLRGIAAGMKYLAEMNYVH 742
            .:..|:.|:.::.. .|.|:.||:::..:.:.:.         ||.:...||:|||:|.:||:||
  Fly   826 LRDEPICIVQDYSHCLGDLNQFLQEHVAETSGLMAKKSLSFGCLVYIATQIASGMKHLEQMNFVH 890

Human   743 RDLAARNILVNSNLVCKVSDFGL----SRYLQDDTSDPTYTSSLGGKIPVRWTAPEAIAYRKFTS 803
            ||||.|:.::...|..||...|.    |.|..|......:|......:|:||.|.|::...|||:
  Fly   891 RDLATRSCIIGPELCVKVCSIGTVINRSAYASDYCQLEGFTGRQSQPMPIRWMAWESVLLGKFTT 955

Human   804 ASDVWSYGIVMWEVMSFG-ERPYWDMSNQDV---INAIEQDYR----LPPPMDCPAALHQLMLDC 860
            .|||||:.:.:||:::|. |:||..:|::.|   |..|.:||:    ||.|.:||..::.||.:|
  Fly   956 KSDVWSFAVALWEILTFAREQPYEHLSDKSVIENIGLIYRDYKMHELLPMPPNCPREIYDLMCEC 1020

Human   861 WQKDRNSRPRFAEI 874
            ||:|.:|||.|.||
  Fly  1021 WQRDESSRPSFREI 1034

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
EPHB1NP_004432.1 EphR_LBD_B1 20..195 CDD:198444 17/77 (22%)
fn3 326..412 CDD:394996 11/85 (13%)
fn3 435..518 CDD:394996 14/82 (17%)
EphA2_TM 542..616 CDD:464211 14/78 (18%)
PTKc_EphR_B 614..882 CDD:173638 96/283 (34%)
SAM_EPH-B1 908..975 CDD:188950
PDZ-binding. /evidence=ECO:0000255 982..984
DdrNP_001014474.3 FA58C 109..261 CDD:238014
PTKc_DDR 753..1040 CDD:270644 98/288 (34%)
Blue background indicates that the domain is not in the aligned region.

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