DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Itsn2 and Cip4

DIOPT Version :9

Sequence 1:NP_001185897.1 Gene:Itsn2 / 20403 MGIID:1338049 Length:1685 Species:Mus musculus
Sequence 2:NP_001097501.1 Gene:Cip4 / 38534 FlyBaseID:FBgn0035533 Length:665 Species:Drosophila melanogaster


Alignment Length:732 Identity:151/732 - (20%)
Similarity:247/732 - (33%) Gaps:232/732 - (31%)


- Green bases have known domain annotations that are detailed below.


Mouse   206 IQKAQSLIDLGSSSSTSS-------TASLSGNSPKTGTSEWAVPQPSRLKYRQKFNSLDKGMSGY 263
            ::....|:..|||.|:|:       .::.:.|:...||..|...:...:...:..::|||    :
  Fly    32 VRVCAKLLASGSSRSSSNNKLAESENSAQNSNNMSWGTELWDQNENLAIHTNRGIDALDK----F 92

Mouse   264 LSGFQARNALLQSNLSQTQLATIWTLADIDGDGQLKA--------------EEFILAMHLTDMAK 314
            .:..:.|.|:      :|:.|           |:|:.              .||.......::.|
  Fly    93 ANFLRDRVAI------ETEYA-----------GKLRRLVKNYQPKKKEEEDNEFTSVQAFRNLLK 140

Mouse   315 -----AGQPLPLTLPPELVPPSFRGGKQVDSVNG-TLPSYQKTQEEEPQKKLP--VTFE------ 365
                 |||       .|:|..|.    |:..:.| ||.|  ||..||.:|.|.  .|.:      
  Fly   141 EVGDLAGQ-------REVVSESL----QLQIIAGVTLLS--KTLREERKKCLSDGATLQQNLTTQ 192

Mouse   366 ----DKRKANYERGNMELE------KRRQVLMEQQQREAER-------KAQKE---KEEWE---R 407
                |:.|.|||:...:.|      ||..:.:...:.|.||       |.|:.   |.|:.   :
  Fly   193 LSSLDRAKRNYEKAYRDSEKAVDSYKRADMDLNLSRAEVERYKNVMTSKIQQSDDAKNEYANQLQ 257

Mouse   408 KQRELQEQEWKKQLELEKRLEKQRELERQREEERR----------------------------KE 444
            |...||:|.:  .:.|...|.:.:||:.:|....|                            :.
  Fly   258 KTNNLQQQHY--SMLLPSVLNRLQELDEKRTRGFREFIVGAADVESSVAPIIARCMEGIVKAGES 320

Mouse   445 IERREAAKQELER-------QRRLEWERLR----------------------RQELLSQKTREQE 480
            |..:|...:.:||       .|.:.:|.|.                      |..:.:.|.:::.
  Fly   321 INEKEDTFKVIERYQSGFTPPRDIPFEDLSKCDPDSVQDSHYSNSTSNHLTIRGTMSANKLKKRV 385

Mouse   481 DIVRL-SSRKKSLHLELEAVNGKHQQISGRLQDVQIRKQTQKTELEVLDKQCDLEIMEIKQ-LQQ 543
            .|..: .|.|.||     ..:|:.:..|. |...|.||:.|            .:|.|:.| :.|
  Fly   386 GIFNIFGSNKNSL-----TADGQKEDFSD-LPPNQRRKKLQ------------AKIAELTQNIAQ 432

Mouse   544 ELKE----YQNKLIYLVPEKQLLNERIKNMQLSNTPDSGISLLHKKSSEKEELCQRLKEQLDALE 604
            |.|.    .:.|::|..           |..|.| |.:....|::...:.|:|...||:....||
  Fly   433 ETKARDGLMKMKIVYEA-----------NSSLGN-PMTVEGQLNESEHKLEKLKVDLKKYQGFLE 485

Mouse   605 K--ETASKLSEMDSFNNQLKCGSMDDCVLQCLLSLLSCLNNLFLLLKELRESYNTQQLALEQLHK 667
            |  :..:..|...:..|||:.|.                          |.|.::...| :..|.
  Fly   486 KASQVPTATSSPQASRNQLQNGH--------------------------RTSRHSNGSA-DDHHD 523

Mouse   668 IKRDKLKEIERKRLEQIQKKKLEDEAARKAKQGKENLWRESIRKEEEEKQKRLQEEKSQDKTQEE 732
            ...|:..:     ...:.:...||..| :.:.|..|....|...|............|...:..|
  Fly   524 DGDDQPDD-----AGSLSRSDSEDNVA-QIQNGHNNNNNGSASPESGLGTSHTSLPGSGQGSANE 582

Mouse   733 ERKAEAKQSETASALVN----YRALYPFEARNHDEMSFSSGDIIQVDEKTVGEPGWLYGSFQGKF 793
            ....|....||....:|    .||||||||.:...:..|.|:.:||.|...|: ||.....:...
  Fly   583 NAIGEDTYYETEVETLNPVGKCRALYPFEASSEGSIPMSEGEELQVIEIDQGD-GWTRVRRENNS 646

Mouse   794 -GW----FPCNYVEKVL 805
             ||    .|.:|:|..|
  Fly   647 NGWDEGFVPTSYIEITL 663

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Itsn2NP_001185897.1 EH 15..107 CDD:197477
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..242 6/28 (21%)
EH 238..317 CDD:197477 14/97 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 335..382 18/65 (28%)
Smc 350..>747 CDD:224117 95/492 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 716..742 3/25 (12%)
SH3_Intersectin2_1 747..803 CDD:212921 21/64 (33%)
INTAP 806..883 CDD:374674 151/732 (21%)
SH3_Intersectin2_2 883..934 CDD:212923
SH3_Intersectin2_3 973..1024 CDD:212925
SH3_Intersectin2_4 1045..1103 CDD:212927
SH3_Intersectin2_5 1118..1171 CDD:212929
RhoGEF 1202..1381 CDD:366202
PH_13 1400..1554 CDD:374702
C2_Intersectin 1543..1677 CDD:176021
Cip4NP_001097501.1 F-BAR_CIP4-like 69..319 CDD:153337 57/285 (20%)
HR1_CIP4-like 412..488 CDD:212009 24/99 (24%)
SH3_CIP4-like 603..661 CDD:212844 20/58 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2056
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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