Protein Alignment Srsf2 and RnpS1

DIOPT Version :9

• Sequence 1: NP_035488.1
• Gene: Srsf2 / 20382
• MGIID: 98284
• Length: 221
• Species: Mus musculus
• Sequence 2: NP_649903.1
• Gene: RnpS1 / 41147
• FlyBaseID: FBgn0037707
• Length: 374
• Species: Drosophila melanogaster
• Alignment Length: 156
• Identity: 58/156 - (37%)
• Similarity: 71/156 - (45%)
• Gaps: 28/156 - (17%)

Mouse    16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKE-SRGFAFVRFHDKRDAEDAMDAMDGAV 79
            :.|..||...:.|.:..:|..:|.|.:|..|.||:... .||.|||.:....|.|.||..|||..
  Fly   221 IHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKHMDGGQ 285

Mouse    80 LDGRELRVQ--MARYGRPPDSHHSRRGPPPRRY--------------------GGGGYGRRSRSP 122
            :||:|:.|.  :....|||    .||..||.|.                    ||||.|.|.:||
  Fly   286 IDGQEITVSPVVLVKQRPP----MRRPSPPMRRPQNNRWRSPPQFNRFNNRGGGGGGGGGRRQSP 346

Mouse   123 RRRRRS-RSRSRSRSRSRSRSRYSRS 147
            .|.||| |.||||..|.|.||..|.|
  Fly   347 MRNRRSPRRRSRSPIRRRRRSNSSDS 372

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Srsf2	NP_035488.1	RRM_SRSF2_SRSF8	16..88	CDD:409751	26/72 (36%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	92..221		31/77 (40%)
RnpS1	NP_649903.1	RRM	<196..>301	CDD:223796	27/79 (34%)
		RRM_RNPS1	221..294	CDD:240811	26/72 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1169
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.030