DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sfrp1 and Corin

DIOPT Version :9

Sequence 1:NP_038862.2 Gene:Sfrp1 / 20377 MGIID:892014 Length:314 Species:Mus musculus
Sequence 2:NP_610297.2 Gene:Corin / 35691 FlyBaseID:FBgn0033192 Length:1397 Species:Drosophila melanogaster


Alignment Length:325 Identity:71/325 - (21%)
Similarity:111/325 - (34%) Gaps:90/325 - (27%)


- Green bases have known domain annotations that are detailed below.


Mouse    18 LLALAAALLA-AGSASEYDYVSFQSDIGSYQSGRFYTK-------------------PPQCVDIP 62
            :|..|.|||| ||..:.|        ..:|.:.:|..|                   |..|  :|
  Fly   727 ILINAFALLAIAGGLAAY--------FNAYPTIKFVNKTIINTIHVEDTTSFGKNPAPGTC--LP 781

Mouse    63 VDLRLCH--NVGYKKMVLPNLLEHETMAEVKQQASSWVPLLNKNCHMGTQVFLCSLFAPVC--LD 123
            :.:|.|.  .:.|...|.||.:.|....|.:....|:..|::..|:....:|||:||.|.|  ..
  Fly   782 IIVRFCQGPQIPYNYTVFPNYIGHFGQLETQTDLDSYEALVDVRCYELVSLFLCTLFVPKCGQSG 846

Mouse   124 RPIYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKC---DKFPEGDVCIAMTPPNTTEASKPQGTTV 185
            ..:.||:.||......|......||...||.|.|   ..||..:.|:.:     .|..:......
  Fly   847 ATVPPCKTLCTETMRRCGFFFDVFGLSLPEYLNCKLFKDFPSSEDCVGL-----DEVREVMRAAT 906

Mouse   186 CPPCD------NELKSEAIIEHLCASEFALRMKIKEVKKEN--------GDKKIVPKKKKPLKLG 236
            .|.||      |....:   |::|........:..|.|.|.        ||.:.:..|       
  Fly   907 HPKCDGFQCDQNRCLPQ---EYVCDGHLDCMDQADEAKCERCGPDEIYCGDSQCIGTK------- 961

Mouse   237 PIKKKELKRLVLFLKNG-ADCP-------CHQLD----NLSHNFLIMGRKVKSQYLLTAIHKWDK 289
                        .:.:| .|||       |.:|.    ::....|.:.|..:.|::...:..||:
  Fly   962 ------------HICDGIIDCPYGQDERNCLRLSERNGDVGTGVLEVYRIGQRQWMPACVKNWDR 1014

Mouse   290  289
              Fly  1015  1014

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sfrp1NP_038862.2 CRD_SFRP1 52..175 CDD:143552 36/148 (24%)
NTR_Sfrp1_like 183..306 CDD:239635 23/133 (17%)
CorinNP_610297.2 CRD_FZ 778..894 CDD:143549 34/117 (29%)
LDLa 911..942 CDD:238060 5/33 (15%)
LDLa 945..979 CDD:238060 7/52 (13%)
SR 980..>1034 CDD:214555 6/35 (17%)
SRCR 992..1086 CDD:278931 5/23 (22%)
Tryp_SPc 1103..1343 CDD:214473
Tryp_SPc 1104..1346 CDD:238113
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3577
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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