Sequence 1: | NP_001123928.1 | Gene: | Sema6b / 20359 | MGIID: | 1202889 | Length: | 886 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
Alignment Length: | 670 | Identity: | 203/670 - (30%) |
---|---|---|---|
Similarity: | 323/670 - (48%) | Gaps: | 128/670 - (19%) |
- Green bases have known domain annotations that are detailed below.
Mouse 11 PALSFFLLLLLGVTYGLFPEEPPPLSVAPRDYLSHY------PVFVGSGPGRLT----AAEGAED 65
Mouse 66 LN----IQRVLRVNR---TLFIGDRDNLYQVELEPSTSTELRYQRKLTWRSNPSDIDVCRMKGK- 122
Mouse 123 QEGECRNFVKVLLLRDE-STLFVCGSNAFNP----ICAN--YSMDTLQLLGDSISGMARCPYDPK 180
Mouse 181 HANVALFSD-----GM--LFTATVTDFLAIDAVIYRS--------LGDRPTLRTVKHDSKWFKEP 230
Mouse 231 YFVHAVEWGSHVYFFFREIAMEFNYLEKVVVSRVARVCKNDVGGSPRVLEKQWTSFLKARLNCSV 295
Mouse 296 PGDSHFYFNVLQAVTGVVSLGGRPVILAVFSTPSNSIPGSAVCAFDMNQVAAVFEGRFREQKSPE 360
Mouse 361 SIWTPVPEDQVPRPRPGCCAAPGMQYNASSALPDEILNFVKTHPLMDEAVPSLGHSP-WIVRTLM 424
Mouse 425 RHQLT--RVAVDVGAGPWGNQ--TIVFLGSEAGTVLKFL--VKPNASVSGTTGPSIFLEEFETYR 483
Mouse 484 PDRCGRPSSAGEWGQRLLSLELDAASGGLLAAFPRCVVRVPVARC-QLYSGCMKNCIGSQDPYCG 547
Mouse 548 WAPDGSCIFLRPGTSATFE----QDVSGASTSGLGDCTGLLRASLSDDRAGLVSVNLLVTSS--- 605
Mouse 606 -VAAFV-VGAVVSGFSVGWF 623 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema6b | NP_001123928.1 | Sema_6B | 58..526 | CDD:200528 | 165/508 (32%) |
PSI | 527..573 | CDD:214655 | 15/50 (30%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 655..677 | ||||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 697..731 | ||||
PHA03269 | 708..>875 | CDD:165527 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 761..886 | ||||
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 163/491 (33%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | 7/34 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |