Sequence 1: | XP_006521932.1 | Gene: | Sema5b / 20357 | MGIID: | 107555 | Length: | 1122 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
Alignment Length: | 595 | Identity: | 207/595 - (34%) |
---|---|---|---|
Similarity: | 308/595 - (51%) | Gaps: | 88/595 - (14%) |
- Green bases have known domain annotations that are detailed below.
Mouse 6 PLALSLLLSSLTLLVSHLSSSQDIASESSSEQQMCTRREHPIVAFEDLKPWVFNFTYPGVRDFSQ 70
Mouse 71 LALDPSRNQLIVGARNYLFRLSLANVSLLQATEWASSEDTRRSCQSKGKTEEECQNYVRVLIV-S 134
Mouse 135 GRKVFMCGTNAFSPVC--------SSRQVGN----------LSRTIEKINGVARCPYDPRHNSTA 181
Mouse 182 VISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFLREN 246
Mouse 247 AVE-HDCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQSAFHLPE- 309
Mouse 310 --QDLIYGVFTTNVNSIAASAVCAFNLSAISKAFNGPFRYQENPRAAWLPI-ANPIPNFQCGTLP 371
Mouse 372 ETGPNENLTERSLQDAQRLFLMSEAVQPVTPEPCVTQDSVRFSHLVVDLV---QAKD---TLYHV 430
Mouse 431 LYIGTESGTILKAL--------STASRSLRGCYLEELHVLPPGRLEPLRSLRILHSARALFVGLS 487
Mouse 488 DRVLRVPLERCSAYHSQGACLGARDPYCGWDGKRQLCSTLEDSSN---MSLWIQNITT------- 542
Mouse 543 -CPVRNVTRD 551 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5b | XP_006521932.1 | Sema | 60..496 | CDD:387663 | 179/473 (38%) |
PSI | 497..544 | CDD:366642 | 13/57 (23%) | ||
TSP1 | 609..662 | CDD:214559 | |||
TSP1 | 667..742 | CDD:214559 | |||
TSP1 | 827..879 | CDD:214559 | |||
TSP1 | 884..936 | CDD:214559 | |||
TSP_1 | 940..981 | CDD:387593 | |||
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 181/477 (38%) |
PSI | 510..>537 | CDD:214655 | 9/26 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |