Sequence 1: | XP_006521932.1 | Gene: | Sema5b / 20357 | MGIID: | 107555 | Length: | 1122 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
Alignment Length: | 1046 | Identity: | 309/1046 - (29%) |
---|---|---|---|
Similarity: | 448/1046 - (42%) | Gaps: | 246/1046 - (23%) |
- Green bases have known domain annotations that are detailed below.
Mouse 51 EDLKPWVFNFTYPGVRDFSQLALDPSRNQLIVGARNYLFRLSLANVSLLQATEWASSEDTRRSCQ 115
Mouse 116 SKGKTEEECQNYVRVLIV-SGRKVFMCGTNAFSPVCSSRQVGNLSRTIEKI-NGVARCPYDPRHN 178
Mouse 179 STAVISSQGELYAATVIDFSGRDPAIYRSLGSGPPLRTAQYNSKWLNEPNFVAAFDIGLFAYFFL 243
Mouse 244 RENAVEH-DCGRTVYSRVARVCKNDVGGRFLLEDTWTTFMKARLNCSRPGEVPFYYNELQSAFHL 307
Mouse 308 PE-------QDLIYGVFTTNVNSIAASAVCAFNLSAISKAFNGPFRYQENPRAAWLPIAN-PIPN 364
Mouse 365 FQCGTLPETGPNENLTERSLQDAQRLF-----LMSEAVQPVTPEPCVTQDSV--RFSHLVVDLVQ 422
Mouse 423 AK---DTLYHVLYIGTESGTILKALSTASR----SLRGCYLEELHVLPPGRLEPLRSLRILHSAR 480
Mouse 481 ------------ALFVGLSDRVLRVPLERC--SAYHSQGACLGARDPYCGWDGKRQLCST----- 526
Mouse 527 -LEDSSNMSLWIQNITT-----CPVRNV-TRDGGFGPWSPWK-PCEHLDGDNSGSCLCRARSCDS 583
Mouse 584 PRPRCGGLECL--------GPSI--HIANCSRNGAWTAWSSWAQCSTSCGIGFQVRQRSCSNPAP 638
Mouse 639 RHGGRICVGKSREERFCNENTPCPVPIFWASWGSWSKCSNNCGGGVQSRRRSCENGNSCP-GCGV 702
Mouse 703 VRSRGWGAGSGETYSPGGVGGSEATLTP--KEFKTCNPEACPE--------VRRNTPWTPWLPVN 757
Mouse 758 VTQGGARQEQRFRFTCRAPLPDPHGLQFGKRRTETRTCPADGTGACDTDALVEDLLRSGSTSPHT 822
Mouse 823 LNGGWATWGPWSSCSRDCELGFRVRKRTCTNPEPRNGGL-------PCVGDAAEYQDCNPQACPV 880
Mouse 881 RGAWSCWTAWSQCSASCGGGHYQRTRSCTSPA-----PSPGED--ICLGLHTEEALCSTQACP-- 936
Mouse 937 EGWSLWSEWGVCTEDGAQSRSRSCEELLPGPGACVGNSSQSRPCP-----YSE-IPV--ILPASS 993
Mouse 994 VEETTS 999 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5b | XP_006521932.1 | Sema | 60..496 | CDD:387663 | 191/472 (40%) |
PSI | 497..544 | CDD:366642 | 16/59 (27%) | ||
TSP1 | 609..662 | CDD:214559 | 8/52 (15%) | ||
TSP1 | 667..742 | CDD:214559 | 10/77 (13%) | ||
TSP1 | 827..879 | CDD:214559 | 11/58 (19%) | ||
TSP1 | 884..936 | CDD:214559 | 15/58 (26%) | ||
TSP_1 | 940..981 | CDD:387593 | 8/40 (20%) | ||
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 192/471 (41%) |
PSI | 545..>579 | CDD:214655 | 11/33 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |