Sequence 1: | NP_033180.2 | Gene: | Sema5a / 20356 | MGIID: | 107556 | Length: | 1074 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477507.1 | Gene: | Sema2a / 36846 | FlyBaseID: | FBgn0011260 | Length: | 724 | Species: | Drosophila melanogaster |
Alignment Length: | 713 | Identity: | 214/713 - (30%) |
---|---|---|---|
Similarity: | 322/713 - (45%) | Gaps: | 157/713 - (22%) |
- Green bases have known domain annotations that are detailed below.
Mouse 47 LREFRAENAVDFSRLTFDPGQKELVVGARNYLFRLELEDLSLIQAVEWECD------EATKK--- 102
Mouse 103 ACYSKGKSK-EECQNYIRVL--LVGGDRLFTCGTNAFTP--VCTIRSLSNLTEIHDQIS---GMA 159
Mouse 160 RCPYSPQHNSTALLTASGE------LYAATAMDFPGRDPAIYRS--LGTLPP------LRTAQYN 210
Mouse 211 SKWLNEPNFVSSYDIGNFTYFFFRENAVEH-DCGKTVFSRAARVCKNDIGGRFLLEDTWTTFMKA 274
Mouse 275 RLNCSRPGEVPFYYNELQGTFFLP-ELDLIYGIFTTNVNSIAASAVCVFNLSAISQAFNGPFKYQ 338
Mouse 339 ENSRSAWLP-----YPNPNPNFQCGTMDQGLYVNLTERNLQD-AQKFI----LMHEVVQPVTTVP 393
Mouse 394 SFMEDNSRFSHLAVDVVQ----GRETLVHIIYLATDYGTIKKVRAPLSQSSGSCLLEEIELFPER 454
Mouse 455 RSEPIRSLQILHSQSVLFVGLQEHVAKIPLKRCH-FHQTRSACIGAQDPYCGWDAVMKKCTSLEE 518
Mouse 519 SLSMTQWDQSIPTCPT----RNLTVDGSFG--------------------PW-----------SP 548
Mouse 549 WTPCTHTDGTAVGSCLCRSRSCDSPAPQCGGWQCEGPRMEITNCSRNGGWTPWTSWSPCSTTCGI 613
Mouse 614 GFQVRQRSCSNPTPRHGGRVCVGQNREERY-------CNEHLLCPPHVFWTGWGPWERCTAQC 669 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema5a | NP_033180.2 | Sema_5A | 50..485 | CDD:200524 | 172/481 (36%) |
PSI | 486..533 | CDD:396154 | 12/47 (26%) | ||
TSP1 | 544..595 | CDD:214559 | 8/81 (10%) | ||
TSP1 | 598..651 | CDD:214559 | 9/59 (15%) | ||
TSP1 | 656..702 | CDD:214559 | 6/14 (43%) | ||
TSP1 | 787..839 | CDD:214559 | |||
TSP1 | 853..896 | CDD:214559 | |||
TSP1 | 899..940 | CDD:214559 | |||
Sema2a | NP_477507.1 | Sema_2A | 66..523 | CDD:200499 | 171/475 (36%) |
Ig_Semaphorin_C | 573..664 | CDD:143180 | 14/118 (12%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R9633 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.840 |