Sequence 1: | NP_035480.3 | Gene: | Sema4f / 20355 | MGIID: | 1340055 | Length: | 777 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
Alignment Length: | 821 | Identity: | 219/821 - (26%) |
---|---|---|---|
Similarity: | 349/821 - (42%) | Gaps: | 177/821 - (21%) |
- Green bases have known domain annotations that are detailed below.
Mouse 5 AERPRPGPRPPPVSLFPPPSSLLLLLLAMLSAPVCGRVPRSVPRTSLPISEADSYLTRFAAPHTY 69
Mouse 70 NYSALLVDPASHTLYVGARDSIFALTLPFSGEKP-RRIDWMVPETHRQNCRKKGKKEDECHNFIQ 133
Mouse 134 ILAIANASHLLTCGTFAFDPKC---GVIDVSSFQ------------QVERLESGRGKCPFEPAQR 183
Mouse 184 SAAVMAGGVLYTATVKNFLGTEPIISRAVGRAEDWIRTETLS-SWLNAPAFVAAMVLSPAEWGDE 247
Mouse 248 DGDDEIFFFFTETSRVLDSYERIKVPRVARVCAGDLGGRKTLQQRWTTFLKADLLCPGPEHGRAS 312
Mouse 313 GVLQDMTELRPQPGAGT-PLFYGIFSSQWEGAAISAVCAFRPQDIRAVLNGPFRELKHDCNRGLP 376
Mouse 377 VMDNEVPQPRPGECITNNMKFQQFGSSLSLPDRVLTFIRDHPLMDRPVFPADGRPLLVTTDTAY- 440
Mouse 441 -LRVVAH-RVTSLSGKEYDVLYLGTEDGHLHRAVRIGAQLS-------------VLEDLALFPET 490
Mouse 491 QPVESMKL--YHDWLLVGSHTEVTQVNTSNCGRLQSCSECILAQDPVCAWSFRLDACVAHA-GEH 552
Mouse 553 ----RGMVQDIESADVSS--LCPKEPGEHPVVFEVPVATVGHVVLPCSPS-------SAWASCVW 604
Mouse 605 HQPS-----------GVTSLT---------------PRR-----DGLEVVVTPGAM--------- 629
Mouse 630 ---GAYACECQEGGAARVVAAYSLVWGSQRGPANRAHTVVGAGLVGFFLGVLAASLTLLLIGRRQ 691
Mouse 692 QRRRQRELLARDKVGLDLGAPPSGTTSYSQDPPSPSPEDER 732 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema4f | NP_035480.3 | Sema_4F | 58..517 | CDD:200522 | 153/494 (31%) |
PSI | 518..569 | CDD:279745 | 15/57 (26%) | ||
Ig | 576..655 | CDD:299845 | 23/128 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 703..742 | 6/30 (20%) | |||
PDZ-binding. /evidence=ECO:0000269|PubMed:11483650 | 775..777 | ||||
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 151/489 (31%) |
PSI | 510..>537 | CDD:214655 | 9/26 (35%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |