Sequence 1: | XP_006501250.1 | Gene: | Sema4a / 20351 | MGIID: | 107560 | Length: | 798 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001260265.1 | Gene: | Sema1a / 34192 | FlyBaseID: | FBgn0011259 | Length: | 1131 | Species: | Drosophila melanogaster |
Alignment Length: | 676 | Identity: | 202/676 - (29%) |
---|---|---|---|
Similarity: | 302/676 - (44%) | Gaps: | 124/676 - (18%) |
- Green bases have known domain annotations that are detailed below.
Mouse 106 LLSDDGNTLYVGAREAVLALNIQNPGIPRLKNMIPWPASERKKTECAFKKKSNETQCFNFIRVLV 170
Mouse 171 SYNATHLYACGTFAFSPACTFIELQDSLLLPILIDKVMDGKGQSPFDPVHKHTAVLVDGMLYSGT 235
Mouse 236 MNNFLGSEPILMRTLGSQPVLKTDIFLRWLHADASFVAAIPSTQVVYFFFEETASEFDFFEELYI 300
Mouse 301 SRVAQVCKNDVGGEKLLQKKWTTFLKAQLLCAQPGQLP--FNIIRHAVLL---PADSPSVSRIYA 360
Mouse 361 VF-TSQWQVGGTRSSAVCAFSLTDIERVFKGKYKELNKETSRWTTYRGSEV-SPRPGSCSMGPSS 423
Mouse 424 --DKALTFMKDHFLMDEHV---VGTPLLVKSGVEY--TRLAVES-ARGLDGSSHVVMYLGTSTGS 480
Mouse 481 LHKAVVPQDS------SAYLVEEIQLSPDSEPVRNLQLA-------PAQGAVFAGFSGG------ 526
Mouse 527 -----IWRVPRANCSVYESCVDCVLARDPHCAWDPESRLCSLLSGSTKPWKQDMERGNPEWV--- 583
Mouse 584 -----CTRGPMARSP--------------------------RRQSPPQLIKEVLTVPNSILELPC 617
Mouse 618 PHLSA---LASYHWSHGRAKISEASATVYNGSLLLLPQDGVGGLY---QCVATE-NGYSYPVVSY 675
Mouse 676 WVDSQDQPLALDPELAGVPRERVQVP 701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sema4a | XP_006501250.1 | Sema | 93..533 | CDD:387663 | 157/465 (34%) |
PSI | 534..578 | CDD:214655 | 11/43 (26%) | ||
Ig | 603..675 | CDD:386229 | 15/78 (19%) | ||
Sema1a | NP_001260265.1 | Sema_1A | 91..546 | CDD:200498 | 157/465 (34%) |
PSI | 545..>579 | CDD:214655 | 12/46 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |