DRSC/TRiP Functional Genomics Resources

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Protein Alignment Selp and CG7763

DIOPT Version :9

Sequence 1:NP_035477.1 Gene:Selp / 20344 MGIID:98280 Length:768 Species:Mus musculus
Sequence 2:NP_001356891.1 Gene:CG7763 / 36235 FlyBaseID:FBgn0040503 Length:232 Species:Drosophila melanogaster


Alignment Length:142 Identity:30/142 - (21%)
Similarity:61/142 - (42%) Gaps:11/142 - (7%)


- Green bases have known domain annotations that are detailed below.


Mouse    22 QLIWFSALISELVNQKEV-----AAWTYNYSTKAYSWNNSRVFCRRHFTDLVAIQNKNEIAHLND 81
            ||:.....:...:.:.|:     :.:.|....:..:|:::...|.:....|.::|::.|:...|:
  Fly    91 QLLTHGTAMGRKLEENEIFQQLGSKYYYIEKEEKLNWHDALDKCHKMGGHLASLQSQEELDRFNN 155

Mouse    82 VIPFFNSYYWIGIRKINNKWTWVGTNKTLTEEAENWADNEPNNKKNNQDCVEIYIKSNSAPGKWN 146
            .:...|. |||.:....|:..:|...|.......:|||.||.   .:.:||:  |::.:.....|
  Fly   156 QLNGLNR-YWIDVTNQFNESEFVSVTKGSKANFLSWADGEPT---KDGECVD--IRTFNGKTTMN 214

Mouse   147 DEPCFKRKRALC 158
            |..||.....:|
  Fly   215 DNSCFANLYFIC 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SelpNP_035477.1 CLECT_selectins_like 42..160 CDD:153062 27/117 (23%)
EGF_CA <168..195 CDD:238011
CCP 200..257 CDD:153056
CCP 262..320 CDD:153056
CCP 324..382 CDD:153056
CCP 386..444 CDD:153056
CCP 448..506 CDD:153056
CCP 510..568 CDD:153056
CCP 580..638 CDD:153056
CCP 642..700 CDD:153056
Endocytosis signal. /evidence=ECO:0000305 756..759
Interaction with SNX17. /evidence=ECO:0000250 759..768
CG7763NP_001356891.1 CLECT 116..228 CDD:153057 27/117 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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