DRSC/TRiP Functional Genomics Resources

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Protein Alignment Selenbp2 and CG7966

DIOPT Version :9

Sequence 1:NP_062287.1 Gene:Selenbp2 / 20342 MGIID:104859 Length:472 Species:Mus musculus
Sequence 2:NP_650256.2 Gene:CG7966 / 41610 FlyBaseID:FBgn0038115 Length:486 Species:Drosophila melanogaster


Alignment Length:484 Identity:240/484 - (49%)
Similarity:336/484 - (69%) Gaps:14/484 - (2%)


- Green bases have known domain annotations that are detailed below.


Mouse     1 MATKCTKCGPGYPTPLEAMK-GPREEIVYLPCIYRNTGTEAPDYLATVDVDPKSPQYSQVIHRLP 64
            |:.|....||||.|||:||: ||||:::|...:..|......|||:||||||:||.|.|::||..
  Fly     1 MSNKTCCRGPGYATPLDAMRSGPREKLLYTVTVQPNLDEPHGDYLSTVDVDPESPTYCQIVHRTF 65

Mouse    65 MPYLKDELHHSGWNTCSSCF--GDSTKS---RNKLILPGLMSSRIYVVDVGSEPRAPKLHKVIEA 124
            .....|||||||||.||||:  .:|:|:   |::|:||.|.|..||::||.::||.|::.|.|:.
  Fly    66 TNRKGDELHHSGWNACSSCYYVDESSKTVPKRDRLVLPSLNSDFIYILDVVTDPRKPEIVKTIDG 130

Mouse   125 SEIQAKCNVSNTHTSHCLASGEVMVNTLGDLQGNGKGSFVLLDGETFEVKGTWEKPGGASPMGYD 189
            ..:::. ||:..||:||||:|.:|::.:||.:|..||.|:|.|.: |...|||.|....:..|||
  Fly   131 DVLKSH-NVTAPHTTHCLANGNIMISVMGDAEGYAKGDFILFDSD-FNCIGTWTKGDKKALCGYD 193

Mouse   190 FWYQPRHNVMVSTEWAAPNVFKDGFNPAHVE-AGLYGSRIFVWDWQRHEIIQTLQM-TDGLIPLE 252
            |||||..:||||:||.|||.::.|:....:| ...||.|:..:.|....:.||:.: :||:.|||
  Fly   194 FWYQPYFDVMVSSEWGAPNKWRRGWKNVDLEDMSQYGCRLNFYKWSTQTLYQTIDLGSDGITPLE 258

Mouse   253 IRFLHDPSATQGFVGCALSSNIQRF-YKNEEGTWSVEKVIQVPSKKVK--GWMLPEMPGLITDIL 314
            |||||:|...:|||||||::.:..| .|::...:..:|||.:|.|.|.  ..:..:|.|:|:||:
  Fly   259 IRFLHNPKKAEGFVGCALNAKVFHFKKKSDSDEFEAKKVIDIPGKLVDTGSGVAEDMGGMISDII 323

Mouse   315 LSLDDRFLYFSNWLHGDIRQYDISNPQKPRLTGQIFLGGSIVRG-GSVQVLEDQELTCQPEPLVV 378
            :||||||||.:.|.|||:|||||::|:.|:||||:||||:|... .:|.|.||:||..:|....|
  Fly   324 ISLDDRFLYVNCWRHGDVRQYDITDPENPKLTGQLFLGGAICSDLPNVIVKEDKELKERPPARYV 388

Mouse   379 KGKRIPGGPQMIQLSLDGKRLYATTSLYSDWDKQFYPDLIREGSVMLQVDVDTVNGGLKLNPNFL 443
            ||:|:.|||||:||||||||||.::||||.|||||||.::.:|..::.:||||||||:.||.:||
  Fly   389 KGRRLEGGPQMLQLSLDGKRLYVSSSLYSPWDKQFYPKMVSQGGHIVLIDVDTVNGGISLNEDFL 453

Mouse   444 VDFGKEPLGPALAHELRYPGGDCSSDIWI 472
            |||..||.||:|.||:|||||||:||||:
  Fly   454 VDFANEPYGPSLPHEMRYPGGDCTSDIWL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Selenbp2NP_062287.1 SBP56 7..472 CDD:283374 237/476 (50%)
CG7966NP_650256.2 SBP56 6..482 CDD:283374 237/477 (50%)
LVIVD repeat 321..358 CDD:293789 24/36 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843220
Domainoid 1 1.000 487 1.000 Domainoid score I387
eggNOG 1 0.900 - - E1_KOG0918
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2930
Inparanoid 1 1.050 488 1.000 Inparanoid score I1405
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG61143
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003227
OrthoInspector 1 1.000 - - otm42483
orthoMCL 1 0.900 - - OOG6_104861
Panther 1 1.100 - - O PTHR23300
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5418
SonicParanoid 1 1.000 - - X2649
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.790

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