DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUBB and alphaTub85E

DIOPT Version :9

Sequence 1:NP_001280141.1 Gene:TUBB / 203068 HGNCID:20778 Length:464 Species:Homo sapiens
Sequence 2:NP_524297.1 Gene:alphaTub85E / 41183 FlyBaseID:FBgn0003886 Length:449 Species:Drosophila melanogaster


Alignment Length:457 Identity:183/457 - (40%)
Similarity:271/457 - (59%) Gaps:24/457 - (5%)


- Green bases have known domain annotations that are detailed below.


Human    15 RSGVRDHPGQQSETLPHATFLQKIKFWEVISDEHGIDPTGTYHGDSDLQL----DRISVYYNEAT 75
            |..:..|.||....:.:|.       ||:...||||.|.|  |..||..:    |..|.:::|..
  Fly     2 RECISVHIGQAGVQIGNAC-------WELYCLEHGIQPDG--HMPSDKTVGGGDDSFSTFFSETG 57

Human    76 GGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 140
            .||:||||:.|||||..:|.||:|.:.|:|.|:..:.|:..|.||:|:||||.|.|:||.|||.:
  Fly    58 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDVVLDRI 122

Human   141 RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNA 205
            ||.|:.|..||||.:.||.|||||||..:||:.::..:|..:....||:.|:|:||..||||||:
  Fly   123 RKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNS 187

Human   206 TLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADL 270
            .|:.|..:|::|..:.:||||:||||.|.|.:..|||.:||.|:...:|.:|..|||.|.||.||
  Fly   188 ILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYMNLNRLIGQIVSSITASLRFDGALNVDL 252

Human   271 RKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAA 335
            .:...|:||:||:||.:..:||:.|.....:..|||.|:|...|:..|.|..||||.|:|:....
  Fly   253 TEFQTNLVPYPRIHFPLATYAPVISVEKAYHEQLTVAEITNACFEPANQMVKCDPRRGKYMACCM 317

Human   336 VFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAVTFIGNST 392
            ::||.:..|:|:..:..::.|.|..||:|.|...|..:...||        ..::.||..:.|:|
  Fly   318 LYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTT 382

Human   393 AIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQ-DATAE--EEE 454
            ||.|.:.|:..:|..|:.::||:|||.||||:|.||.||..::..|..:|::.. |:|.|  |:|
  Fly   383 AIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGIDSTTELGEDE 447

Human   455 DF 456
            ::
  Fly   448 EY 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUBBNP_001280141.1 PLN00220 39..449 CDD:215107 174/422 (41%)
beta_tubulin 39..446 CDD:276956 173/418 (41%)
alphaTub85ENP_524297.1 PTZ00335 1..448 CDD:185562 182/454 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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