DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TUBB and alphaTub67C

DIOPT Version :9

Sequence 1:NP_001280141.1 Gene:TUBB / 203068 HGNCID:20778 Length:464 Species:Homo sapiens
Sequence 2:NP_524009.2 Gene:alphaTub67C / 39130 FlyBaseID:FBgn0087040 Length:462 Species:Drosophila melanogaster


Alignment Length:443 Identity:174/443 - (39%)
Similarity:258/443 - (58%) Gaps:27/443 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    41 WEVISDEHGIDPTG--------TYHGDS-----DLQLDRISVYYNEATGGKYVPRAILVDLEPGT 92
            ||:...||||:..|        |..|.|     |...:....::.|...||.|||:|.|||||..
  Fly    21 WELYLLEHGINLDGSLKTKEELTASGSSASVGHDTSANDARTFFTETGNGKQVPRSIFVDLEPTV 85

Human    93 MDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTH 157
            :|.||:|...:::.|:..:.|:..|.||:|:|.|:.|.|::|.|...::|.||.||.||||.:.|
  Fly    86 IDDVRNGCMRELYHPEQLISGKEDAANNYARGRYSIGKEVIDRVTSRLQKIAEQCDSLQGFLIFH 150

Human   158 SLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCI 222
            |||||||||..:||:.::..:|..:....|:|.||||||..|||||||.|:.|..::::|..:.:
  Fly   151 SLGGGTGSGFTSLLVERLSTDYSKKCKLDFAVYPSPKVSTAVVEPYNALLTTHSTMDHSDCVFMV 215

Human   223 DNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFM 287
            ||||:||||..:|.:..|.|.:||.|::..:|..|..|||.|.:|.||.:...|:|||||:||.:
  Fly   216 DNEAIYDICNNSLGVDRPAYRNLNRLIAQIVSSTTASLRFSGSMNVDLNEFQTNLVPFPRIHFPL 280

Human   288 PGFAPLTS--RGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQM 350
            ..:|||.|  |.:.:..|:|.  ||...|::.|||..||||.|:::....::||.:..|:|:..:
  Fly   281 VAYAPLMSAERSAHEQHAITT--LTNACFESSNMMVKCDPRAGKFMACCMLYRGDVVPKDVNAAV 343

Human   351 LNVQNKNSSYFVEWIPNNVKTAV-----CDIPPRGL---KMAVTFIGNSTAIQELFKRISEQFTA 407
            ..:::|....||:|.|...|..:     ..:|...|   ..|...:.|:|||...|..:|.:|..
  Fly   344 SAIKSKRHIQFVDWCPTGFKIGINYEKPAFVPDGDLAKTSRACCMLSNTTAISVAFSNLSYKFDL 408

Human   408 MFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE--EEDFGE 458
            ||:::||:|||.||||:|.|||||..|:..|..::::.....|||  :|||.|
  Fly   409 MFKKRAFVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNAEEGGDEDFDE 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUBBNP_001280141.1 PLN00220 39..449 CDD:215107 167/430 (39%)
beta_tubulin 39..446 CDD:276956 167/427 (39%)
alphaTub67CNP_524009.2 alpha_tubulin 2..446 CDD:276955 167/426 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.