DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUBB and betaTub60D

DIOPT Version :9

Sequence 1:NP_001280141.1 Gene:TUBB / 203068 HGNCID:20778 Length:464 Species:Homo sapiens
Sequence 2:NP_523842.2 Gene:betaTub60D / 37888 FlyBaseID:FBgn0003888 Length:454 Species:Drosophila melanogaster


Alignment Length:431 Identity:384/431 - (89%)
Similarity:410/431 - (95%) Gaps:8/431 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    39 KFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEA------TGGKYVPRAILVDLEPGTMDSVR 97
            ||||:||:|||||..|.|.|||||||:|:|||||||      :||||||||||:|||||||:|||
  Fly    19 KFWEIISEEHGIDSNGIYVGDSDLQLERVSVYYNEASAVTRSSGGKYVPRAILLDLEPGTMESVR 83

Human    98 SGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGG 162
            |||:||:|||||||:||||||||||||||||||||||:||||||||.|:||||||||||||||||
  Fly    84 SGPYGQLFRPDNFVYGQSGAGNNWAKGHYTEGAELVDNVLDVVRKECENCDCLQGFQLTHSLGGG 148

Human   163 TGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEAL 227
            ||||||||||||||||||||||||:|||||||||||||||||||||:||||||||||||||||||
  Fly   149 TGSGMGTLLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSIHQLVENTDETYCIDNEAL 213

Human   228 YDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 292
            |||||||||::.|:|||||||||.|||||||||||||||||||||||||||||||||||||||||
  Fly   214 YDICFRTLKVSNPSYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 278

Human   293 LTSRGSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKN 357
            ||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||.|||||
  Fly   279 LTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLAVQNKN 343

Human   358 SSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEG 422
            |||||||||||||||||||||:||||:.|||||:||||||||||||||:||||||||||||||||
  Fly   344 SSYFVEWIPNNVKTAVCDIPPKGLKMSSTFIGNTTAIQELFKRISEQFSAMFRRKAFLHWYTGEG 408

Human   423 MDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEE 463
            ||||||||||||||||||||||||:|||::|  |..|..:|
  Fly   409 MDEMEFTEAESNMNDLVSEYQQYQEATADDE--FDPEVNQE 447

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUBBNP_001280141.1 PLN00220 39..449 CDD:215107 377/415 (91%)
beta_tubulin 39..446 CDD:276956 375/412 (91%)
betaTub60DNP_523842.2 PLN00220 1..450 CDD:215107 384/431 (89%)
beta_tubulin 2..432 CDD:276956 375/412 (91%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 111 1.000 Domainoid score I6230
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
98.830

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