DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUBB and betaTub56D

DIOPT Version :9

Sequence 1:NP_001280141.1 Gene:TUBB / 203068 HGNCID:20778 Length:464 Species:Homo sapiens
Sequence 2:NP_725896.1 Gene:betaTub56D / 37238 FlyBaseID:FBgn0284243 Length:456 Species:Drosophila melanogaster


Alignment Length:424 Identity:402/424 - (94%)
Similarity:416/424 - (98%) Gaps:0/424 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    40 FWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQI 104
            |||:||||||||.||.|||||||||:||:||||||:||||||||:||||||||||||||||||||
  Fly    29 FWEIISDEHGIDATGAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQI 93

Human   105 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 169
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly    94 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGT 158

Human   170 LLISKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 234
            |||||||||||||||||:|||||||||||||||||||||||||||||||||||||||||||||||
  Fly   159 LLISKIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRT 223

Human   235 LKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 299
            ||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   224 LKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQ 288

Human   300 QYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEW 364
            |||||||||||||:||||||||||||||||||||||:||||||||||||||||:|||||||||||
  Fly   289 QYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 353

Human   365 IPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 429
            |||||||||||||||||||:.||||||||||||||||||||||||||||||||||||||||||||
  Fly   354 IPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFT 418

Human   430 EAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEE 463
            |||||||||||||||||:|||:|:.:|.||.|.|
  Fly   419 EAESNMNDLVSEYQQYQEATADEDAEFEEEQEAE 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUBBNP_001280141.1 PLN00220 39..449 CDD:215107 393/408 (96%)
beta_tubulin 39..446 CDD:276956 391/405 (97%)
betaTub56DNP_725896.1 beta_tubulin 26..435 CDD:276956 391/405 (97%)
PLN00220 29..438 CDD:215107 393/408 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 426 1.000 Domainoid score I606
eggNOG 1 0.900 - - E1_COG5023
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 884 1.000 Inparanoid score I397
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53784
OrthoDB 1 1.010 - - D259639at33208
OrthoFinder 1 1.000 - - FOG0000096
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100137
Panther 1 1.100 - - O PTHR11588
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2834
SonicParanoid 1 1.000 - - X99
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1110.910

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