DRSC/TRiP Functional Genomics Resources

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Protein Alignment TUBB and gammaTub37C

DIOPT Version :10

Sequence 1:NP_001280141.1 Gene:TUBB / 203068 HGNCID:20778 Length:464 Species:Homo sapiens
Sequence 2:NP_476922.1 Gene:gammaTub37C / 35199 FlyBaseID:FBgn0010097 Length:457 Species:Drosophila melanogaster


Alignment Length:428 Identity:142/428 - (33%)
Similarity:242/428 - (56%) Gaps:33/428 - (7%)


- Green bases have known domain annotations that are detailed below.


Human    39 KFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQ 103
            :||:.:..||||.|.|.....:....||..|::.:|....|:|||:|:||||..::::.:.|:.:
  Fly    20 EFWKRLCLEHGISPDGVLEDFATDGQDRKDVFFYQADDNHYIPRAVLIDLEPRVINNIMTSPYSK 84

Human   104 IFRPDNFVFGQ--SGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSG 166
            ::..:|....:  .|||||||.| :::|.::.:.|.|::.:||:..|.|:||.|.||:.||||||
  Fly    85 LYNQENVFLSKHGGGAGNNWASG-FSQGEKVQEEVFDILDREADGSDSLEGFVLCHSIAGGTGSG 148

Human   167 MGTLLISKIREEYPDRIMNTFSVVPS-PKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDI 230
            ||:.::.::.|.:|.:::.|:||.|: .::||.||:|||:.|::.:|.:..|....:||.||..|
  Fly   149 MGSYVLERLSERFPKKLIQTYSVFPNQDEISDVVVQPYNSILTLKRLTKCADSVVVLDNTALNRI 213

Human   231 CFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTS 295
            ....|.:.|||:..:|:|||..||..||.||:|..:|.:|..|..:::|.|:|||.|.|:.||.|
  Fly   214 ATERLHIQTPTFTQINNLVSTIMSLSTTTLRYPSYMNNNLIGLTASLIPTPQLHFLMTGYTPLMS 278

Human   296 --RGSQQYRALTVPELTQQVFDAKNMM-AACDPRHGR--YLTVAAVFRGRMSMKEVDEQMLNVQN 355
              ......|..||.::.:::...|||| :|...:..|  ::::..:.:|.:...:|.:.:..::.
  Fly   279 DCETKTSVRKTTVLDVMRRLLQPKNMMVSALTDKQSRQCFVSILNIIQGEVDPSQVHKSLQRIRE 343

Human   356 KNSSYFVEWIPNNVKTAVCDIPPR------------GLKMAVTFIGNSTAIQELFKRISEQFTAM 408
            :..:.|:.|.|.:::.|:    ||            ||.||     |.|.|..||||...|:..:
  Fly   344 RKLANFIPWGPASIQVAL----PRSSPYVQSAHKVSGLMMA-----NHTGISSLFKRALAQYDKL 399

Human   409 FRRKAFLHWYTGEGMDEMEFTE---AESNMNDLVSEYQ 443
            .:|.|||..:..|.|.:.:.||   |...::.||.||:
  Fly   400 RKRNAFLDNFRRESMFQDDLTELDIARDTVDCLVQEYE 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TUBBNP_001280141.1 PLN00220 39..449 CDD:215107 142/428 (33%)
gammaTub37CNP_476922.1 gamma_tubulin 4..436 CDD:276957 140/425 (33%)

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