DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Scnn1a and ppk26

DIOPT Version :9

Sequence 1:NP_035454.2 Gene:Scnn1a / 20276 MGIID:101782 Length:700 Species:Mus musculus
Sequence 2:NP_648125.3 Gene:ppk26 / 38835 FlyBaseID:FBgn0035785 Length:597 Species:Drosophila melanogaster


Alignment Length:653 Identity:125/653 - (19%)
Similarity:225/653 - (34%) Gaps:209/653 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse    60 EPSEPRQPTEEEEALIEFHRSYRELFQFFCNNTTIHGAIRLVCSKHNRMKTAFW-AVLWLCTFGM 123
            :.||....|:::.......::.:.:...:|:.|||||...|...|...::..|| :||.|..|..
  Fly    46 DDSEDEVDTKKQIKYGSGFQAAKAIIHEYCDYTTIHGIRYLGEKKRPLLERLFWISVLVLSVFTC 110

Mouse   124 MYWQFAL-LFEEYFSYPVSLNINLNSD---KLVFPAVTVCTLNPYRYTEIKEDLEELDRITEQTL 184
            :  :..| :::::.:.||.::....|.   ::.|||||||       .|.|            |.
  Fly   111 V--KLTLNIWDKWNNNPVIVSFAEKSTPVWQIPFPAVTVC-------PETK------------TR 154

Mouse   185 FDLYKYNSSYTRQAGGRRRSTRDLRGALPHPLQRLRTPPPPNPARSARSASSSVRDNNPQVDRKD 249
            .:::.:..||                               :..|..:|..|.:      ||..|
  Fly   155 REIFNFTDSY-------------------------------HQVRDFQSNVSGI------VDLSD 182

Mouse   250 WKIGF-----QLCNQNKSDCFYQTYSSGVDAVREWYRFHYINILSRLPDTSPALEEEALGSFIFT 309
            .:.|.     |:|..:..|     .:.|....|.      :.|:..|.:.||..::..|     .
  Fly   183 KQKGLYGAVSQVCEPHLHD-----VTLGNKTRRG------MEIIDALTEVSPHFDDTYL-----N 231

Mouse   310 CRFNQAPCNQANYSQFHHPMY---GNCYTFNNKNNSNLWMS---------------SM------- 349
            |::..:|   ...|...|...   |.|::||:.:.:.::.:               ||       
  Fly   232 CKWRNSP---VKCSDIFHKFVTEDGVCFSFNSLSPAEIFRAEGIIPDFIFREENRLSMDWNVEDG 293

Mouse   350 ----------------PGVNNGLSLTLRTEQNDFIPLL-STVTGARVMVHGQDEPAFMDDGGFNV 397
                            ||...||.|.:...:.||..:. ..|.|.::::|...:.|.:....|.:
  Fly   294 YSASADTSPYPNRVLGPGARAGLYLFMGGAEIDFDDMCRGPVQGFKILLHTPGDVAQVSKQYFRI 358

Mouse   398 RPGVETSISMRKEALDSLGGNYGDCTENGSDVPVKNLYPSK----------------YTQQVCIH 446
            ....|..||:|.:.:.:..|             :|:..|::                |:|..|..
  Fly   359 PFDQEVLISIRPKIITTSDG-------------LKHYEPNRRQCYFQKERELRYFNIYSQSNCEL 410

Mouse   447 SCFQENMIKKCGCAYIFYPKPKGVEFCDYLKQSSWGYCYYKLQAAFSLDSLGCFSKCRKPCSVTN 511
            .|.....:.||||.....|:...:..|...                   ||.|:::......:..
  Fly   411 ECLANFTLTKCGCVKFSMPRNVNMPVCGDA-------------------SLKCYNQAEDELLLRE 456

Mouse   512 YK---LSAGYSR--------WPSVKSQDWIFEMLSLQNNY--TIN----------NKRNG--VAK 551
            :.   ::||.:.        .||..|..:..|:.....:|  .||          :||.|  :::
  Fly   457 FTQGLVNAGENTRGETECNCLPSCTSIAYEAEISQADFDYKTVINTDSPEGKEEQSKRQGMKMSR 521

Mouse   552 LNIFFKELNYKTNSESPSVTMVSLLSNLGSQWSLWFGSSVLSVVEMAELIFDLLVITLIMLLHRF 616
            ::|||||..:.|:..|........|:|.|....|:.|.|:||:||       |:....:.|:...
  Fly   522 VSIFFKEAQFLTSRRSELYGTTDFLANCGGLLGLFMGVSMLSIVE-------LIYFCTVRLISNL 579

Mouse   617 RSR 619
            |.|
  Fly   580 RMR 582

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Scnn1aNP_035454.2 ENaC 80..677 CDD:273304 122/633 (19%)
deg-1 88..600 CDD:273309 118/604 (20%)
ppk26NP_648125.3 ASC 74..570 CDD:279230 119/611 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 108 1.000 Domainoid score I6420
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X60
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.