Sequence 1: | NP_001277603.1 | Gene: | Scn9a / 20274 | MGIID: | 107636 | Length: | 1984 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
Alignment Length: | 2596 | Identity: | 815/2596 - (31%) |
---|---|---|---|
Similarity: | 1166/2596 - (44%) | Gaps: | 864/2596 - (33%) |
- Green bases have known domain annotations that are detailed below.
Mouse 47 PKPSSDLEAGKQLPFIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNK---GKAIFRFNATPALYM 108
Mouse 109 LSPFSPLRRISIKILVHSLFSMLIMCTILTNCIFMTMSNPPDWTKNVEYTFTGIYTFESLIKILA 173
Mouse 174 RGFCVGEFTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGAL 238
Mouse 239 IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRK-------------DLEQNETLESIM 290
Mouse 291 STAESEEELKRYFYYLEGSKDALLCGFSTDSGQCPEGYECVTAGRNPDYGYTSFDTFGWAFLALF 355
Mouse 356 RLMTQDYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQ-- 418
Mouse 419 -------------KELEFQQMLDRLKKEQEEAEAIAAAAAEYTSLGRSRIMGLSE---------S 461
Mouse 462 SSETSRLSS----------KSAKERRNRRKKKKQKLSSGEEKGDDEKLSKSGSEES--------- 507
Mouse 508 --IRKKSFHLGVEGHHRAREKRLSTPNQ-SPLSIRGSLF--SARRSSRTSLFSFKGRGRDLGSET 567
Mouse 568 EFADDEHSIFGDNESRRGSLFVPH--------RPRERRSSNISQASRSPPVLPVNGKMHSAVDCN 624
Mouse 625 GVVSLVDGPSALMLPNGQLLPEVIIDKATSDDSGTTNQMRKKRLSSSYFLSEDMLNDPHLRQRAM 689
Mouse 690 SRASILTNTVEEL-EESRQKCPPWWYRFAHTFLIWNCSPY--WIKFKKFIYFIVMDPFVDLAITI 751
Mouse 752 CIVLNTLFMAMEHHPMTDEFKNVLAVGNLVFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVT 816
Mouse 817 LSLVELFLADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAV 881
Mouse 882 VGMQLFGKSYKECVCKINENCKLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCM---EVAGQTMC 943
Mouse 944 LIVYMMVMVIGNLVVLNLFLALLLSSFSSDNLTAIEE---------------------------- 980
Mouse 981 ----------------------------------------------------------------- 980
Mouse 981 ----------------------------------------------------------------- 980
Mouse 981 --------------------------------------------------DTD--ANNLQIAVAR 993
Mouse 994 IKRG--------------------INYVKQ----------------------------------- 1003
Mouse 1004 -----------------------TLREFILKSFSKK-----------PKGSK-----DTKRTADP 1029
Mouse 1030 NNKRENYISNRTLAEISKDHN----FLKEKDKISGFSSSL------------------------- 1065
Mouse 1066 -------DKSFMDE-----NDYQS----------------------------------------- 1077
Mouse 1078 ----------------------------------------------------------------- 1077
Mouse 1078 --------------------FIHNP---------------------------------------- 1082
Mouse 1083 ---------------SLTVTVPIA----------------------------------PGE---- 1094
Mouse 1095 ----------SDLENMNTEELSS---DSDSDYS-----KERRNRSSSSEC--------------- 1126
Mouse 1127 ----STVDNPLPG----EEEAEAEPIN---------ADEPEACFTDGCVRRF----PCCQVNIDS 1170
Mouse 1171 GKGKVWWTIRKTCYRIVEHSWFESFIVLMILLSSGALAFEDIYIEKKKTIKIILEYADKIFTYIF 1235
Mouse 1236 ILEMLLKWVAYGYKTYFTNAWCWLDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALS 1300
Mouse 1301 RFEGMRVVVNALIGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYECVNTTDGSRFSVSQVANR 1365
Mouse 1366 SECFALMNVSGNVRWKNLKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDSVNVNAQPIYEYNLY 1430
Mouse 1431 MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKLGG--QDIFMTEEQKKYYNAMKKLGSKKPQK 1493
Mouse 1494 PIPRPGNKFQGCIFDLVTNQAFDITIMVLICLNMVTMMVEKEGQTDYMSFVLYWINVVFIILFTG 1558
Mouse 1559 ECVLKLISLRHYYFTVGWNIFDFVVVILSIVGMFLAEMIEKYFVSPTLFRVIRLARIGRILRLIK 1623
Mouse 1624 GAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEAGINDMFNFETFGNSMIC 1688
Mouse 1689 LFQITTSAGWDGLLAPILNSAPPDCDPKKVHPGSSVEGDCGNPSVGIFYFVSYIIISFLVVVNMY 1753
Mouse 1754 IAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFCKLSDFAAALDPPLLIAKPNK 1818
Mouse 1819 VQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDS---LRSQMEERFMSANPSKVSYEPITT 1880
Mouse 1881 TLKRKQEDVSATIIQRAYRRYRLRQNVKNISSIYIKDGDRDDDLPNKEDIVFDNVNENSSP 1941 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Scn9a | NP_001277603.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 26..55 | 1/7 (14%) | |
I. /evidence=ECO:0000305 | 112..410 | 142/310 (46%) | |||
Ion_trans | 147..410 | CDD:278921 | 127/275 (46%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 458..540 | 22/112 (20%) | |||
Na_trans_cytopl | 487..606 | CDD:288761 | 29/140 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 574..609 | 7/42 (17%) | |||
II. /evidence=ECO:0000305 | 725..988 | 145/477 (30%) | |||
Ion_trans | 760..955 | CDD:278921 | 104/197 (53%) | ||
Na_trans_assoc | 981..1185 | CDD:284034 | 70/613 (11%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1015..1039 | 6/39 (15%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1089..1145 | 17/134 (13%) | |||
III. /evidence=ECO:0000305 | 1178..1486 | 168/309 (54%) | |||
Ion_trans | 1224..1464 | CDD:278921 | 138/239 (58%) | ||
Na_channel_gate | 1456..1508 | CDD:240441 | 31/53 (58%) | ||
IV. /evidence=ECO:0000305 | 1495..1793 | 153/297 (52%) | |||
Ion_trans | 1530..1768 | CDD:278921 | 123/237 (52%) | ||
GPHH | 1780..1835 | CDD:293510 | 31/54 (57%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1933..1984 | 4/9 (44%) | |||
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 106/234 (45%) |
Ion_trans | 705..902 | CDD:278921 | 106/200 (53%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 149/258 (58%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 31/53 (58%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 124/238 (52%) | ||
GPHH | 2331..2386 | CDD:293510 | 31/54 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.710 |