Sequence 1: | NP_033161.2 | Gene: | Scn7a / 20272 | MGIID: | 102965 | Length: | 1681 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
Alignment Length: | 2518 | Identity: | 616/2518 - (24%) |
---|---|---|---|
Similarity: | 975/2518 - (38%) | Gaps: | 908/2518 - (36%) |
- Green bases have known domain annotations that are detailed below.
Mouse 10 LVPFTTESLELIEN-HIAKKCNEDPEEEEGLKP--SRNLEAGKRLPIPYGTLPRGTVSEPLEDVD 71
Mouse 72 PYYYVKRNTFMVLN---RSRVIFRFNAVSIFCTLSPLNSLRRAAIKALVHPLFRLLILISVLTDS 133
Mouse 134 ILMCMSNLPEWILAIENTLLGIYAFEILVKVIARGIWAGSFSFLGDLWNWLDFSVTLFELITRFS 198
Mouse 199 PLSSFLMLKTIRTFRILKIIPLNHGLQSIVMTLAQCLKKLFGAIALALFFLAVFSLLGMGLFMGN 263
Mouse 264 LKHKCLRWPEENENETLH-------NRTGSLNYSPERINFYYMEGAKYALLCGNRTDAGQCPEGY 321
Mouse 322 VCVKEGTNPDNGFTSFDNFGWSLLAMFRLMTQDYPELLYHQILYASGKVYMIFFVMISFWFAFYL 386
Mouse 387 TSLFLGILTMTYEKEKQRACEE------------SGGLDPKCQQTVKELDEEND----------- 428
Mouse 429 -----------------------------------------------------------AAEMET 434
Mouse 435 TQIEMKKR-------------SPT------------------------------------SINTT 450
Mouse 451 -------------LDILE--DTT--LGHREEPETS------------------------------ 468
Mouse 469 -----------RKKCPICWHKFIKTCFIWKCS--PCWVKLNEFADRVITHPLADLFLVICIVLNI 520
Mouse 521 CFLALEHFPMSEELRSLLHVGNLVFIGIYTIEMILKIIAMHPYGYFQISWNIFDSILVVLELTEI 585
Mouse 586 LLADVEGLAVLITVPLI-FIKLGKYGPPFKSLMRILGSSLMALKDLVLLLCIFVYFSAVFGMKLF 649
Mouse 650 GRSYKDCVCHIKEDCQP-QRWHMSDFLHAYMTVFRILCGEWIETLWECM---EVAGQAWCIPFYM 710
Mouse 711 MVILIGNLLILYLFVT-LVSSFSYYDATS---EVNKEAK-------------------------- 745
Mouse 746 ---------------------------------------------NLQLAMAR------------ 753
Mouse 754 ----------------------------------------------------------------- 753
Mouse 754 --------------IKSGINSM------------LLKLMCTERSVPTE--ATDQI--C------- 781
Mouse 782 -----------------------------DPSVKENI--------------------------SG 791
Mouse 792 HTLSELSNTQ-----------------------TFLRYKDQSSSTEK------------------ 815
Mouse 816 -----TPVTESESQSLI--------------------------ASPSASET-------VPIASGE 842
Mouse 843 S---------------DIENLDNKETRSKSGNGGSKE---KMKQSSSSECSTVD----------- 878
Mouse 879 -------------------------------------------------IAISEEEEMVYEHEK- 893
Mouse 894 -------------SKLH--------------KNGYER------------------------KSS- 906
Mouse 907 ----------------------------------------------------TGQISR------- 912
Mouse 913 ----------------------------------------------------------------- 912
Mouse 913 ---------------------------------------------------------ESRNGKIW 920
Mouse 921 KNIRKTCCKIVENSWFECFIGLVTLLCTGTLALEDIYIDQRKTTKILLEYADMIFAYIFILEMLL 985
Mouse 986 KWVAYGFKAFFSNNWYKLDFMVVIVFCLSLIGKTREDLNPLTSIKFLRA---LRVLSQFERMKVV 1047
Mouse 1048 LRALIKTTLPTVSVFLVCLMIWLLFSVIGVQLFAGKFYECIDPTKGERFPVFEVMNKSQCEKLLF 1112
Mouse 1113 NESMPWENAKLNFDNVGNGFLSLLQVATFNGWISIMNSAIDSVGVNMQPSFEYNLYMYSYFIIFV 1177
Mouse 1178 IFGLFLPLCMLIGVIIRNFN--KQKIKQGGSNIFITVKQKKQYRALKKLLYADVQKPTPRPRNKF 1240
Mouse 1241 QGFLFDLVTHRVFNVIIILLICFQATTIMIQKDEQSPQMETAIFWM----NSIFVMLFTLECILK 1301
Mouse 1302 LTAFRCHYFTSAWNVHDFMVVIFSITGLLLPLTIGQYFVPPSLVQLILLSRVIHILRPGKGPKVF 1366
Mouse 1367 HDLMLPLILALPALLNISLLIFLVMFIYAIFGMYNFAYVKKEAGINDVSNFETFGSSMLCLFQVT 1431
Mouse 1432 TFSGWDGMLDAIFNSQWSDCDPDKINPGTQVKGDCGSPSVGISYFVSYILISWLIIVNMYIVLIM 1496
Mouse 1497 EFLSIPSQKKSRTLSEDDFRRFFRVWNRFDPDRTQYIDSSKLSDFAAALDPPLFMAKPNKGQLVA 1561
Mouse 1562 MDLPMAAGDRIHCLDILLAFTKRVMGKDERVE---KILSEIESGFMLANPFKITYEPITTTLKRK 1623
Mouse 1624 QEAVSATIIQRAYKSYRLRQNDKNVSDTPAIDDRRDDLTSKGAHSGKI 1671 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Scn7a | NP_033161.2 | Ion_trans | 140..405 | CDD:278921 | 89/271 (33%) |
Ion_trans | 523..739 | CDD:278921 | 90/224 (40%) | ||
Na_trans_assoc | 743..927 | CDD:284034 | 66/814 (8%) | ||
Ion_trans | 951..1204 | CDD:278921 | 114/257 (44%) | ||
Na_channel_gate | 1195..1246 | CDD:240441 | 21/52 (40%) | ||
Ion_trans | 1275..1497 | CDD:278921 | 92/225 (41%) | ||
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 77/228 (34%) |
Ion_trans | 705..902 | CDD:278921 | 83/201 (41%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 114/255 (45%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 21/53 (40%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 95/242 (39%) | ||
GPHH | 2331..2386 | CDD:293510 | 26/54 (48%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.720 |