Sequence 1: | NP_001192250.1 | Gene: | Scn10a / 20264 | MGIID: | 108029 | Length: | 1958 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261172.1 | Gene: | NaCP60E / 37981 | FlyBaseID: | FBgn0085434 | Length: | 2896 | Species: | Drosophila melanogaster |
Alignment Length: | 2646 | Identity: | 824/2646 - (31%) |
---|---|---|---|
Similarity: | 1182/2646 - (44%) | Gaps: | 850/2646 - (32%) |
- Green bases have known domain annotations that are detailed below.
Mouse 25 EKQIAAHRA---AKKGRPKQRGQ-----KDKSEKPRPQLDLKACNQLPRFYGELPAELVGEPLED 81
Mouse 82 LDPFYSTHRTFIVLDK---SRTISRFSATWALWLFSPFNLIRRTAIKVSVHSWFSIFITVTILVN 143
Mouse 144 CVCMTRTDLPEKLEYAFTVVYTFEALIKILARGFCLNEFTYLRDPWNWLDFSVITLAYVGAAIDL 208
Mouse 209 RGISGLRTFRVLRALKTVSVIPGLKVIVGALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLK 273
Mouse 274 NKCIKNGTDPHKADNLSSEMAGDIFIKPGTTD---------PLLCGNGSDAGHCPNDYVCRKTSD 329
Mouse 330 NPDFNYTSFDSFAWAFLSLFRLMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAV 394
Mouse 395 VTMAYEEQSQATIAEIEAKEKKFKEALE-----VLQKEQEVLAALGIDTTS---LYSHNGSPLAP 451
Mouse 452 KNANERRPRVKSRMSEGST---------DDNRSLQSDP------------------------YNQ 483
Mouse 484 R------------------------RMSF----LGL-----------------SSGRRRASHSSV 503
Mouse 504 FHFRAPSQDVSFPDGILDDGVFHGDQESRRSSILLGRGAGQAGPLPRSPLPQSPNPGPRRGEEGQ 568
Mouse 569 RGVPTGELATGAPEGPALDAAGQ----KNFLSADYLNEPFRAQRAMSVVSIMTSVIEELEESKLK 629
Mouse 630 CPPCLISLAQKYLIWECC--PKWKKFKMVLFELVTDPFAELTITLCIVVNTVFMAMEHYPMTDAF 692
Mouse 693 DAMLQAGNIVFTVFFTMEMAFKIIAFDPYYYFQKKWNIFDCVIVTVSLLELSTSKKGSLSVLRTF 757
Mouse 758 RLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTFILAIIVFIFALVGKQLLSENYGCRR---DGI 819
Mouse 820 SVWNGERLRWHMCDFFHSFLVVFRILCGEWIENMWVCMEVSQDY---ICLTLFLTVMVLGNLVVL 881
Mouse 882 NLFIALLLNSFSADNLTAPEDD-GEVNNLQVALARI----------------------------- 916
Mouse 917 ------QVFGHRAS--------------------------------------------------- 924
Mouse 925 ----------------------------------------------------RAITSYIRSHCRL 937
Mouse 938 R---------------------------------------------------------------- 938
Mouse 939 -------WPKVETQLGMKPP--------------------LTSCKAE--NH----------IATD 964
Mouse 965 AVNAAVGNLAKPALG--------------------------------------GPKEN-----HG 986
Mouse 987 DF---------------------------ITDPN---------VWVSVPIAEGESDLDELEE--- 1012
Mouse 1013 -----------DVEHASQS---SWQEESPKGQQELLQQVQKCEDH-------------------- 1043
Mouse 1044 ---QAARSPPSGMSSEDLAPYLG----------ERWQR------------------------EES 1071
Mouse 1072 PR---------------------------------------VPA--------------------- 1076
Mouse 1077 ----------------------------------------------------------------- 1076
Mouse 1077 -----EGVDDTSS---------SEGSTVDCPDPEEILRKIPELAEE--------LDE-------- 1111
Mouse 1112 ----------------------PDDCFPEGCTR----RCP----CCKVNTSKFPWATGWQVRKTC 1146
Mouse 1147 YRIVEHSWFESFIIFMILLSSGALAFEDNYLEEKPRVKSVLEYTDRVFTFIFVFEMLLKWVAYGF 1211
Mouse 1212 KKYFTNAWCWLDFLIVNISLTSLIAKILEYSDVASIKALRTLRALRPLRALSRFEGMRVVVDALV 1276
Mouse 1277 GAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFSRCVDTRSNPFSVVNSTFVTNKSDCYNQNNTGH 1341
Mouse 1342 FFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYAAVDSRDINSQPNWEESLYMYLYFVVFIIFG 1406
Mouse 1407 GFFTLNLFVGVIIDNFNQQKKKIRG--QDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGF 1469
Mouse 1470 VFDIVTRQAFDIIIMALICLNMITMMVETDNQSEEKTKVLGRINQFFVAVFTGECVMKMFALRQY 1534
Mouse 1535 YFTNGWNVFDFIVVILSISSLLFSAILSSLESYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLF 1599
Mouse 1600 ALMMSLPALFNIGLLLFLVMFIYSIFGMASFANVIDEAGIDDMFNFKTFGNSMLCLFQITTSAGW 1664
Mouse 1665 DGLLSPILNTGPPYCDPNRPNSNG-SKGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNV 1728
Mouse 1729 ATEESTEPLSEDDFDMFYETWEKFDPEATQFIAFSALSDFADTLSGPLRIPKPNQNILIQMDLPL 1793
Mouse 1794 VPGDKIHCLDILFAFTKNVLGESGELDS---LKTNMEEKFMATNLSKASYEPIATTLRCKQEDIS 1855
Mouse 1856 ATIIQKAYRNYMLQRSLMLSNPLHVPRAEEDGVSLPREGYVTFMANDNGGLPDKSETASATSFPP 1920
Mouse 1921 SYDSVTRGL--------------SDRANISTSSSMQNEDEVTAKEG 1952 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Scn10a | NP_001192250.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 27..54 | 5/34 (15%) | |
I. /evidence=ECO:0000305 | 116..404 | 138/296 (47%) | |||
Ion_trans | 147..406 | CDD:278921 | 130/267 (49%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 444..483 | 13/71 (18%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 539..583 | 6/43 (14%) | |||
II. /evidence=ECO:0000305 | 646..910 | 127/272 (47%) | |||
Ion_trans | 681..893 | CDD:278921 | 105/217 (48%) | ||
Na_trans_assoc | 903..1148 | CDD:284034 | 80/824 (10%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1006..1094 | 27/300 (9%) | |||
III. /evidence=ECO:0000305 | 1141..1450 | 168/310 (54%) | |||
Ion_trans | 1170..1428 | CDD:278921 | 146/257 (57%) | ||
Na_channel_gate | 1420..1472 | CDD:240441 | 30/53 (57%) | ||
IV. /evidence=ECO:0000305 | 1459..1758 | 153/299 (51%) | |||
Ion_trans | 1494..1733 | CDD:278921 | 127/239 (53%) | ||
GPHH | 1743..1800 | CDD:293510 | 30/56 (54%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1901..1958 | 14/66 (21%) | |||
NaCP60E | NP_001261172.1 | Ion_trans | 152..371 | CDD:278921 | 109/223 (49%) |
Ion_trans | 705..902 | CDD:278921 | 94/204 (46%) | ||
Ion_trans | 1768..2019 | CDD:278921 | 148/259 (57%) | ||
Na_channel_gate | 2009..2063 | CDD:240441 | 30/53 (57%) | ||
Ion_trans | 2085..2320 | CDD:278921 | 128/240 (53%) | ||
GPHH | 2331..2386 | CDD:293510 | 29/54 (54%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG2301 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D37221at33208 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100419 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR10037 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.820 |