| Sequence 1: | NP_001192143.1 | Gene: | Rxrb / 20182 | MGIID: | 98215 | Length: | 524 | Species: | Mus musculus |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001259168.1 | Gene: | usp / 31165 | FlyBaseID: | FBgn0003964 | Length: | 508 | Species: | Drosophila melanogaster |
| Alignment Length: | 531 | Identity: | 214/531 - (40%) |
|---|---|---|---|
| Similarity: | 273/531 - (51%) | Gaps: | 138/531 - (25%) |
- Green bases have known domain annotations that are detailed below.
|
Mouse 70 MGDSGRDSRSPDSSSPNPLSQG-----IRPSSPPGPPLTPSAPPPPMPPPPLGSPFPVISSSMGS 129
Mouse 130 PGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPPPGGPGAG-KRLCA 193
Mouse 194 ICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQRNRCQYCRYQKCLATGMK 258
Mouse 259 REAVQEERQR-----------------------GKDKDGDGDGAG-----------------GAP 283
Mouse 284 EEMPVDRILEAELAVE-QKSDQGVE----GPGATGGGGSSPN--DPVTNICQAADKQLFTLVEWA 341
Mouse 342 KRIPHFSSLPLDDQVILLRAGWNELLIA--------------------------SFSHRSIDVR- 379
Mouse 380 DGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRDMRMDKTELGCLRAIILFNPDAKG 444
Mouse 445 LSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPI 509
Mouse 510 DTFLMEMLEAP 520 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rxrb | NP_001192143.1 | Modulating. /evidence=ECO:0000250 | 1..191 | 25/126 (20%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..167 | 20/101 (20%) | |||
| Nuc_recep-AF1 | <122..176 | CDD:288658 | 5/53 (9%) | ||
| NR_DBD_RXR | 191..266 | CDD:143514 | 63/74 (85%) | ||
| Hinge | 258..382 | 61/197 (31%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 263..285 | 11/61 (18%) | |||
| NR_LBD_RXR_like | 285..502 | CDD:132741 | 109/250 (44%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 300..323 | 6/28 (21%) | |||
| usp | NP_001259168.1 | NR_DBD_RXR | 102..178 | CDD:143514 | 63/75 (84%) |
| NR_LBD_RXR_like | 237..480 | CDD:132741 | 109/250 (44%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C167834508 | |
| Domainoid | 1 | 1.000 | 189 | 1.000 | Domainoid score | I3286 |
| eggNOG | 1 | 0.900 | - | - | E33208_3BA8J | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 363 | 1.000 | Inparanoid score | I2163 |
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D389616at33208 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001500 | |
| OrthoInspector | 1 | 1.000 | - | - | otm44370 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_103349 | |
| Panther | 1 | 1.100 | - | - | O | PTHR24083 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4818 |
| SonicParanoid | 1 | 1.000 | - | - | X118 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| 14 | 13.790 | |||||