DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDE12 and Pde12

DIOPT Version :9

Sequence 1:NP_808881.3 Gene:PDE12 / 201626 HGNCID:25386 Length:609 Species:Homo sapiens
Sequence 2:NP_848783.3 Gene:Pde12 / 211948 MGIID:2443226 Length:608 Species:Mus musculus


Alignment Length:609 Identity:538/609 - (88%)
Similarity:562/609 - (92%) Gaps:1/609 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MWRLPGARAALRVIRTAVEKLSRAEAGSQTAAGAMERAVVRCVPSEPKLSLSFALADGSHKNMQR 65
            |||||| |:|||.:|:.||:.||||||:..|..||||||||||||||||||||||||||||||||
Mouse     1 MWRLPG-RSALRGVRSVVERRSRAEAGTHEAVRAMERAVVRCVPSEPKLSLSFALADGSHKNMQR 64

Human    66 DQSEPLGRVLSRIATNALKGHAKAAAAKKSRKSRPNASGGAACSGPGPEPAVFCEPVVKLYYREE 130
            ||||||||.||||||||||||||.||||||||:|.::||||||...||||...||||||||||||
Mouse    65 DQSEPLGRALSRIATNALKGHAKVAAAKKSRKNRAHSSGGAACEATGPEPVATCEPVVKLYYREE 129

Human   131 AVAEDVLNVDAWQDGAVLQIGDVKYKVERNPPAFTELQLPRYIMAGFPVCPKLSLEFGDPASSLF 195
            ||||||||||||||||||||||||||||||||.||||||||||||||||||||.:||||||||:|
Mouse   130 AVAEDVLNVDAWQDGAVLQIGDVKYKVERNPPTFTELQLPRYIMAGFPVCPKLGVEFGDPASSVF 194

Human   196 RWYKEAKPGAAEPEVGVPSSLSPSSPSSSWTETDVEERVYTPSNADIGLRLKLHCTPGDGQRFGH 260
            |||||.|||||||....|:|.|.||..|:|.||.|:||||||.||||||||:||||||:|||||.
Mouse   195 RWYKEVKPGAAEPGDSGPASSSHSSQPSAWIETGVDERVYTPCNADIGLRLRLHCTPGNGQRFGP 259

Human   261 SRELESVCVVEAGPGTCTFDHRHLYTKKVTEDALIRTVSYNILADTYAQTEFSRTVLYPYCAPYA 325
            ||||||:|.|||||||||||||||||||||||:.|||||||||||||||||||||||||||||||
Mouse   260 SRELESLCPVEAGPGTCTFDHRHLYTKKVTEDSFIRTVSYNILADTYAQTEFSRTVLYPYCAPYA 324

Human   326 LELDYRQNLIQKELTGYNADVICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSK 390
            ||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||||
Mouse   325 LELDYRQNLIQKELTGYNADLICLQEVDRAVFSDSLVPALEAFGLEGVFRIKQHEGLATFYRKSK 389

Human   391 FSLLSQHDISFYEALESDPLHKELLEKLVLYPSAQEKVLQRSSVLQVSVLQSTKDSSKRICVANT 455
            |.|||||||||.|||:||||||||||||.|.|.|||||||||||||:||||||.||||:||||||
Mouse   390 FRLLSQHDISFQEALKSDPLHKELLEKLALNPLAQEKVLQRSSVLQISVLQSTTDSSKKICVANT 454

Human   456 HLYWHPKGGYIRLIQMAVALAHIRHVSCDLYPGIPVIFCGDFNSTPSTGMYHFVINGSIPEDHED 520
            ||||||||||||||||.|||.||||||.|||||||||||||||||||||||||||:|||.|||||
Mouse   455 HLYWHPKGGYIRLIQMEVALVHIRHVSRDLYPGIPVIFCGDFNSTPSTGMYHFVISGSIAEDHED 519

Human   521 WASNGEEERCNMSLTHFFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNALEVEQVIPLPSHEEVT 585
            ||||||||||:|.|:|.|||||||||||||||||||||||||||||||.||||||||||||||||
Mouse   520 WASNGEEERCSMPLSHCFKLKSACGEPAYTNYVGGFHGCLDYIFIDLNTLEVEQVIPLPSHEEVT 584

Human   586 THQALPSVSHPSDHIALVCDLKWK 609
            ||||||||||||||||||||||||
Mouse   585 THQALPSVSHPSDHIALVCDLKWK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDE12NP_808881.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..111 15/21 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 206..230 12/23 (52%)
EEP 299..608 CDD:294334 288/308 (94%)
Pde12NP_848783.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 90..111 14/20 (70%)
EEP 298..607 CDD:294334 288/308 (94%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83954816
Domainoid 1 1.000 579 1.000 Domainoid score I5534
eggNOG 1 0.900 - - E1_COG5239
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H14272
Inparanoid 1 1.050 1093 1.000 Inparanoid score I5066
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG56656
OrthoDB 1 1.010 - - D432310at33208
OrthoFinder 1 1.000 - - FOG0005860
OrthoInspector 1 1.000 - - oto124749
orthoMCL 1 0.900 - - OOG6_104860
Panther 1 1.100 - - LDO PTHR12121
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1970
SonicParanoid 1 1.000 - - X4860
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1818.300

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