DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rps5 and RpS5a

DIOPT Version :9

Sequence 1:NP_033121.2 Gene:Rps5 / 20103 MGIID:1097682 Length:204 Species:Mus musculus
Sequence 2:NP_001285360.1 Gene:RpS5a / 32700 FlyBaseID:FBgn0002590 Length:228 Species:Drosophila melanogaster


Alignment Length:200 Identity:176/200 - (88%)
Similarity:187/200 - (93%) Gaps:0/200 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse     5 EAATPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIV 69
            |....:..|.|:|||||:||.|||.:|||||||||:||||:|:||||||||||||||||||||||
  Fly    29 ETNVVSTTELPEIKLFGRWSCDDVTVNDISLQDYISVKEKFARYLPHSAGRYAAKRFRKAQCPIV 93

Mouse    70 ERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 134
            ||||.|:||.|||||||||..|||||:||||||||||||||:||:||||||||||||||||||||
  Fly    94 ERLTCSLMMKGRNNGKKLMACRIVKHSFEIIHLLTGENPLQILVSAIINSGPREDSTRIGRAGTV 158

Mouse   135 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERV 199
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   159 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDELERV 223

Mouse   200 AKSNR 204
            |||||
  Fly   224 AKSNR 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rps5NP_033121.2 uS7_Eukaryote 18..204 CDD:271246 170/185 (92%)
RpS5aNP_001285360.1 uS7_Eukaryote 42..228 CDD:271246 170/185 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840996
Domainoid 1 1.000 265 1.000 Domainoid score I1901
eggNOG 1 0.900 - - E1_COG0049
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H783
Inparanoid 1 1.050 351 1.000 Inparanoid score I2257
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62189
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003144
OrthoInspector 1 1.000 - - otm43365
orthoMCL 1 0.900 - - OOG6_100920
Panther 1 1.100 - - O PTHR11205
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2272
SonicParanoid 1 1.000 - - X2112
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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