Sequence 1: | NP_033116.2 | Gene: | Polr2c / 20021 | MGIID: | 109299 | Length: | 275 | Species: | Mus musculus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_477419.1 | Gene: | RpII33 / 34796 | FlyBaseID: | FBgn0026373 | Length: | 275 | Species: | Drosophila melanogaster |
Alignment Length: | 275 | Identity: | 188/275 - (68%) |
---|---|---|---|
Similarity: | 244/275 - (88%) | Gaps: | 1/275 - (0%) |
- Green bases have known domain annotations that are detailed below.
Mouse 1 MPYANQPTVRITELTEENVKFIIENTDLAVANSIRRVFIAEVPIIAIDWVQIDANSSVLHDEFIA 65
Mouse 66 HRLGLIPLTSDDIVDKLQYSRDCTCEEFCPECSVEFTLDVRCNEDQTRHVTSRDLISNSPRVIPV 130
Mouse 131 TSRNRDNDPNDYVE-QDDILIVKLRKGQELRLRAYAKKGFGKEHAKWNPTAGVAFEYDPDNALRH 194
Mouse 195 TVYPKPEEWPKSEYSELDEDESQAPYDPNGKPERFYYNVESCGSLRPETIVLSALSGLKKKLSDL 259
Mouse 260 QTQLSHEIQSDVLTI 274 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Polr2c | NP_033116.2 | RNAP_II_RPB3 | 7..266 | CDD:132909 | 177/259 (68%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 203..226 | 11/22 (50%) | |||
RpII33 | NP_477419.1 | RNAP_II_RPB3 | 7..267 | CDD:132909 | 177/259 (68%) |
RPOLD | 19..261 | CDD:214766 | 163/241 (68%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167849612 | |
Domainoid | 1 | 1.000 | 359 | 1.000 | Domainoid score | I960 |
eggNOG | 1 | 0.900 | - | - | E1_COG0202 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H2017 | |
Inparanoid | 1 | 1.050 | 415 | 1.000 | Inparanoid score | I1820 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53541 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004444 | |
OrthoInspector | 1 | 1.000 | - | - | oto93045 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101363 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR11800 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X3150 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.760 |