DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA2 and osy

DIOPT Version :10

Sequence 1:NP_997698.1 Gene:ABCA2 / 20 HGNCID:32 Length:2466 Species:Homo sapiens
Sequence 2:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster


Alignment Length:401 Identity:105/401 - (26%)
Similarity:175/401 - (43%) Gaps:65/401 - (16%)


- Green bases have known domain annotations that are detailed below.


Human  2048 PQRMPVST-KPVEDDVDVASERQRVLRGDAD-----NDMVKIENLTKVYKSRKIGRILAVDRLCL 2106
            |...|.:| .....|:|:|:.|:..:...:.     ...|.:....|:|.|.|...:: :|.|.:
  Fly     9 PPTAPAATATTANSDLDLAARRRLFISQPSTLATRRQQAVCVRRAHKMYGSSKNPNVV-LDGLNM 72

Human  2107 GVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFV-------NGHSVLKELLQVQQSLGYCP 2164
            .|..|..:||||.:|.|||:....:.|......||.:|       .|..|      ....:||.|
  Fly    73 TVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGGRPGSRGSGV------PGPRIGYMP 131

Human  2165 QCDALFDELTAREHLQLYTRLRGISWKDEARVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAI 2229
            |..||:.|.|.||.|..:..:..:|..|.....::.|:.|.|.. |.|.....|||.:|::|.|:
  Fly   132 QEIALYGEFTMRETLIYFGIISAMSKGDIEDRTEFLLKLLNLPN-ASKFVKNLSGGQQRRVSLAV 195

Human  2230 ALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGR-SVVLTSHSMEECEALCTRLAIMVNGR 2293
            ||:..|..:.|||||.|:||..|:.:|:.::|:.|.|. :|::|:|.::|| |....:.::..|:
  Fly   196 ALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTVIITTHYIDEC-AQAHMIGLLRGGK 259

Human  2294 LRCLGSIQHLKNRFGDGYMITVRTKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISL 2358
            :....|..:|:.::           ::.|::||  |...:..:.|.|.|..            |:
  Fly   260 MLAEESPDYLRQQY-----------NADSLEDV--FLKLSVLQNMGKRRRS------------SI 299

Human  2359 AQVFSKMEQVSGVLGIEDYSVSQTTLDNVFVNFAKKQS----DNLEQQETEPPSALQSPLGCLLS 2419
            ||..  :|||:..      ::|...||......|.:.|    ||:...     ||.:.|:.....
  Fly   300 AQEI--VEQVTVP------AISNPALDMSDEQHAAEISGEFGDNISMS-----SAARDPISTTAP 351

Human  2420 LLRPRSAPTEL 2430
            ...|...|.|:
  Fly   352 AAPPLPPPQEI 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA2NP_997698.1 rim_protein 58..2398 CDD:130324 97/367 (26%)
osyNP_001034071.1 CcmA 50..285 CDD:440746 75/256 (29%)
YadH 578..773 CDD:440604
Blue background indicates that the domain is not in the aligned region.

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