DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ABCA2 and Eato

DIOPT Version :9

Sequence 1:NP_997698.1 Gene:ABCA2 / 20 HGNCID:32 Length:2466 Species:Homo sapiens
Sequence 2:NP_001036360.1 Gene:Eato / 34783 FlyBaseID:FBgn0028539 Length:1597 Species:Drosophila melanogaster


Alignment Length:2062 Identity:497/2062 - (24%)
Similarity:811/2062 - (39%) Gaps:618/2062 - (29%)


- Green bases have known domain annotations that are detailed below.


Human   474 QRNLGLLVHLMTSNPKILYAPAGSEVDRVILKANETFA----------FVGNVTHYAQVWLNISA 528
            ||||..|:.:.:....:|.|.....|..|:.:.|:..|          |.||...|. .:..||.
  Fly    21 QRNLLPLLLICSGFAGVLTAYLHWSVKPVLHQINQFEAKNEMVLRELYFPGNELDYI-YYSPISP 84

Human   529 EIRSFLEQGRLQQHLRWLQQYVAELRLHPEALNLSLDELPPALRQDNFSLPSGMALLQQLDTIDN 593
            .:...:                       :.|.:.|..:|..||.:|.|....:.:.||.    .
  Fly    85 NVEDIM-----------------------DLLRVDLGIIPERLRPNNNSFEMQLEMEQQC----R 122

Human   594 AACGWIQFMSKVSVDIFKGFPDEES--IVNYTL--NQAYQDNVTVFASVIFQTRKDGSLPPHVHY 654
            .:|        .::| |...|:..|  ...|:|  ||           :....||.......:::
  Fly   123 GSC--------FAID-FHRVPNRGSDRKFRYSLSSNQ-----------MRISPRKRFVNDEEIYH 167

Human   655 KIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDMMER-------------AIIDTFV 706
            :|..:.                        |...||:.:|.::::             .::.:..
  Fly   168 QIDDDD------------------------YIRSGFLSLQHILDKQYMKYQELGKDFEVVVSSMP 208

Human   707 GHDVVEPGSYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMTIQHIVAEKEHRLKEVMKT 771
            ..:|:...|:                .:.:...||.::..|..::..:...|.||::.|||.:..
  Fly   209 NMEVISMDSH----------------RLTYFGTLCSILFNVVLLSSFVVPFVEEKQNGLKEFLNL 257

Human   772 MGLNNAVHWVAWFITGFV---QLSISVTALTAILKYGQVLMHSHVVIIWLFLAVYAVATIMFCFL 833
            :...:.::.:.:|:..||   .|.|.|..:..:.|....:..::|.:::|   :|.::|:.:.:|
  Fly   258 VTPMSFLNGLTFFLIRFVCYTLLMIFVLVVAYLYKALGSICFAYVAVLFL---LYILSTMSYAYL 319

Human   834 VSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYFAL 898
            :|:.:.....|. .||:...:  :||.:..:|..........|        ||..|         
  Fly   320 ISICFHSVFYAK-IGGLAMLI--IPYAFSFVRSWATSLAFVCF--------STNTF--------- 364

Human   899 YEVAGVGIQWHTFSQS-------------PVEGDDFNLLLAVTMLMVDAVVYGILTWYIEAVHPG 950
              :.|:.| :.|||..             .::.:...:.....:|:..:.:|.:|..|:..|.||
  Fly   365 --LEGLDI-FQTFSNKRKNREFGAVDVFRVIKSNSSTMFSVYVVLVFQSFLYAMLYNYLGCVFPG 426

Human   951 MYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWARTPRLSVMEEDQACAMESRRFEETRGMEEEPT 1015
            ..||.||.:|.|....::...|.|       :..|||                          .|
  Fly   427 PGGLKRPMFFFLDPKTYMKRQRNE-------YTTTPR--------------------------GT 458

Human  1016 HLPLVVCVDKLTKVYKDDKK--LALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGS 1078
            |   .:.:.:|.|.::..|:  |..:.|::.:...::...||||||||||.|:::.||.|..||.
  Fly   459 H---AIIITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGK 520

Human  1079 ATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRREMDKMIEDLEL 1143
            ..:..   ..::...|..:|.||||:|....:|..:||.|:::|:...:.:.|...|:.::.|.|
  Fly   521 IIVCS---ERDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKLKKLGL 582

Human  1144 SNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLS 1208
            |:||:...:.|||||||:||:.||..|.::.:|||||::|:|..:||.:||::|..:..:.:|::
  Fly   583 SDKRNEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLRKEKAVLVT 647

Human  1209 THHMDEADLLGDRIAIISHGKLKCCGSPLFLKGTYGDGYRLTLVKRPAEPGGPQEPGLASSPPGR 1273
            ||:|:||::|||.|.|:::|||:..||||.||...|.||||.|....                  
  Fly   648 THYMEEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRLKLEIND------------------ 694

Human  1274 APLSSCSELQVSQFIRKHVASCLLVSDTSTELSYILPSEAAKKGAFERLFQHLERSLDALHLSSF 1338
               .:..|:::.:.|...|.:..:::..:..:...||  .|.|..|.::...||.....|.:.:.
  Fly   695 ---FTSREVEIMEIIHHFVPTARVLNVVNPTVYICLP--YAYKNCFAQMLYRLETESKELGIHTI 754

Human  1339 GLMDTTLEEVFLKVSEEDQSLENSEADVKESRKDVLPGAEGPASGEGHAGNLARCSELTQSQASL 1403
            .:.||:||:|||:.:.|...::..:.    ||.|                               
  Fly   755 SMTDTSLEDVFLRCAGEQDQVDTPDG----SRND------------------------------- 784

Human  1404 QSASSVGSARGDEGAGYTDVYGDYRPLFDNPQDPDNVSLQEVEAEALSRVGQGSRKLDGGWLKVR 1468
                             ..:...|:.|.|:|.                     .|.|...|:.| 
  Fly   785 -----------------APLLAHYKRLQDHPP---------------------HRGLFQLWMAV- 810

Human  1469 QFHGLLVKRFHCARRNSKALFSQILLPAFFVCV--AMTV--ALSVPEIGDLPPLVLSPS-----Q 1524
                 ..|::...  :::.|::.|:|...||||  |:.|  |:|:.|..:..||.||..     .
  Fly   811 -----FYKKWTFI--SNEWLYTLIMLCIPFVCVFGAILVMHAMSLVENEEALPLKLSQMGSGVIY 868

Human  1525 YHNYTQPRGNFIPYANEERREYRLRLSPDASPQQLVSTFRLPSGVGATCVLKSPANGSLGPTLNL 1589
            .||         |..:....|.:||       ||:                  ..||....|::|
  Fly   869 VHN---------PTGHHAHLEQQLR-------QQI------------------ELNGITAKTMHL 899

Human  1590 SSGESRLLAARFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSPASPDEDLQAWNVSLPPTAGPEM 1654
            ..                                     |:...:...|||..|::         
  Fly   900 RG-------------------------------------SNDVKNESLDLQRDNLA--------- 918

Human  1655 WTSAPSLPRLVREPVRCTCSAQGTGFSCPSSVGGHPPQMRVVTGDILTDITGHNVSEYLLFTSDR 1719
                                                        |.|..:.|             
  Fly   919 --------------------------------------------DFLEQVIG------------- 926

Human  1720 FRLHRYGAITFGNVLKSIPASFGTRAPPMVRKIAVRRAAQVFYNNKGYHSMPTYLNSLNNAILRA 1784
             .:..||            ...||...|.:         ::||:...|||....:|.:::|:|:.
  Fly   927 -IIDMYG------------GGRGTSDTPTI---------EIFYSGNRYHSSVELINLVDSAMLKL 969

Human  1785 NLPKSKGNPAAYGITVTNHPMNKTSASLS---LDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVA 1846
            ..|:|:       |..|..|:.:..:.:|   |:|        .|:.:.:.|.|....|:.....
  Fly   970 GRPESE-------IDTTYVPIRRFVSDISPSRLEY--------YAVIVPIGMFFFMFYFISLPFR 1019

Human  1847 EKSTKAKHLQFVSGCNPIIYWLANYVWDMLNYLVPATCCVIILFV----FDLPA-------YTSP 1900
            |.:...|.||.:|   ...||.|::.:|||          |::||    |.|.:       ||:.
  Fly  1020 EYANGFKQLQTMS---RFTYWFAHFTFDML----------ILIFVCVALFSLQSLMMPSELYTTA 1071

Human  1901 TNFPAVLSLFLLYGWSITPIMYPASFWFEVPS--SAYVFLIVINLFIG--ITATVATFLLQLFEH 1961
            .....|||:| .||.|..||:|.....|:..|  |.|:.|::|...|.  ||::.|. .::|.| 
  Fly  1072 ELKVIVLSIF-FYGCSYLPILYALGNNFKSISTISTYLLLMLIVSAIAPLITSSNAA-AMKLHE- 1133

Human  1962 DKDLKVVNSYLKSCFLIF-PNYNLGHGLMEMAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLV- 2024
                      .|..||.| |::||.|..      ..|||      .|...:.|    .:.:||: 
  Fly  1134 ----------TKIAFLCFLPDFNLNHQF------RIINE------NFITRRHP----ALIKGLIS 1172

Human  2025 -------AMAVEGVVGFLLTIMCQYNFLRRP----------QRM------PVSTKPVEDDVDVAS 2066
                   |.||..:|....||:.::.:|||.          ||.      .:.:.|:.:..|.|.
  Fly  1173 QDTFFAYATAVGVMVMAFFTIVLEHKYLRRRIHDGIWEWAFQRKKYNSTGTLPSTPISEIDDCAR 1237

Human  2067 ERQRVLRGDADNDMVK---------IENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGA 2122
            |.:||      .|::|         :.||.|.|     |..||||.:......||||||||||||
  Fly  1238 EEKRV------TDLIKDPLNDHSLIVHNLRKRY-----GDKLAVDGVSFAAAQGECFGLLGVNGA 1291

Human  2123 GKTSTFKMLTGDESTTGGEAFVNGHSVLKELLQVQQSLGYCPQCDALFDELTAREHLQLYTRLRG 2187
            ||||||:|:..:....||...:.|..:.:..|:.::..|||||.|||...:||.:.|.....|||
  Fly  1292 GKTSTFQMIAANLPLDGGTIRIKGADIREHELKYREYFGYCPQYDALNKFMTAEQCLYYMALLRG 1356

Human  2188 I---------SWKDEARVVKWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEP 2243
            :         |.|:.   ||:.|||:.||||.......||||.||||..|:|:||.||.:.||||
  Fly  1357 LSRRRTDGPASCKEH---VKYWLEKMHLTKYQKVQVRHYSGGTKRKLLAAMAMIGAPALVLLDEP 1418

Human  2244 TTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFG 2308
            |||:||.:|||||..|.|.....|:||||||||:|||.||.|||||.:|:.:||.:|..||..  
  Fly  1419 TTGVDPISRRFLWQCIKDFQGKDRTVVLTSHSMDECEELCNRLAIMAHGKFKCLNNICALKRL-- 1481

Human  2309 DGYMITVR----TKSSQSVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEH--ISLAQVFSKMEQ 2367
            .|:.|.::    |::..:|..:.......||...|:|.|...:.|.:.::.  :..:.||...|:
  Fly  1482 SGFTIKLKMKADTETEMNVSTITGTLKSEFPGLELRESHAGTLTYFVSTQESVVLWSSVFKIAEE 1546

Human  2368 VSG----VLGIEDYSVSQTTLDNVFVNF---AKKQSDNLEQQETEPP 2407
            ..|    .| :.||||::.||:::|:.|   ||.||.:.:......|
  Fly  1547 YLGDRLSAL-VADYSVNECTLEDIFLKFEREAKSQSTSRQTSVQRRP 1592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCA2NP_997698.1 rim_protein 58..2398 CDD:130324 496/2051 (24%)
ABC_subfamily_A 1021..1240 CDD:213230 82/220 (37%)
ABC_subfamily_A 2081..2304 CDD:213230 111/240 (46%)
EatoNP_001036360.1 ABC2_membrane_3 <209..347 CDD:289468 29/159 (18%)
CcmA 460..767 CDD:224054 107/332 (32%)
ABC_subfamily_A 461..679 CDD:213230 82/220 (37%)
ABC2_membrane_3 <937..1117 CDD:289468 56/217 (26%)
ABC_subfamily_A 1255..1479 CDD:213230 110/231 (48%)
drrA 1262..1573 CDD:130256 132/321 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148375
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100045
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.660

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