DRSC/TRiP Functional Genomics Resources

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Protein Alignment ELAVL4 and CG3594

DIOPT Version :9

Sequence 1:XP_011539191.1 Gene:ELAVL4 / 1996 HGNCID:3315 Length:416 Species:Homo sapiens
Sequence 2:NP_523855.1 Gene:CG3594 / 37964 FlyBaseID:FBgn0035063 Length:250 Species:Drosophila melanogaster


Alignment Length:185 Identity:38/185 - (20%)
Similarity:65/185 - (35%) Gaps:30/185 - (16%)


- Green bases have known domain annotations that are detailed below.


Human    45 EPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTN---LIVNYLPQNMTQEEFRSLFGSIG 106
            |........|......|:.|....|...:......||||   |.|..|....|:::....|.:.|
  Fly    74 EAAAEGSAASGAEEEESAENGQITSDQLSSLLRGASKTNRHVLYVTNLNFETTKDDLELHFSAAG 138

Human   107 EIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARP-SSASIRDANL 170
            .::|.::.: |..|   |:.||...|....:.|.. |:...||.:.|||..:.. ...|....|:
  Fly   139 TVKSIRIPK-KRRG---GFAFVEMADLSSFQNAFQ-LHNTELQGRNIKVQISEAGKKKSANKKNI 198

Human   171 YVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEA 225
            ......|....:..::.|::.|:.                     :||.::.|:|
  Fly   199 IKQKNRKLAEMRNEQKTFTKSGKF---------------------YDKDLKKEKA 232

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ELAVL4XP_011539191.1 ELAV_HUD_SF 79..415 CDD:273741 33/151 (22%)
CG3594NP_523855.1 RRM3_Prp24 114..184 CDD:240744 20/74 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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