DRSC/TRiP Functional Genomics Resources

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Protein Alignment ELAVL4 and tut

DIOPT Version :9

Sequence 1:XP_011539191.1 Gene:ELAVL4 / 1996 HGNCID:3315 Length:416 Species:Homo sapiens
Sequence 2:NP_729346.1 Gene:tut / 317996 FlyBaseID:FBgn0052364 Length:230 Species:Drosophila melanogaster


Alignment Length:182 Identity:38/182 - (20%)
Similarity:68/182 - (37%) Gaps:51/182 - (28%)


- Green bases have known domain annotations that are detailed below.


Human    32 ESRNCSFMIISTMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQE 96
            ||:.|:..:         ||..:.|:......|..        :..|:.|..|.::.:|:|.:..
  Fly     4 ESKYCTSQV---------NGTITITTRKVLDENLK--------SLLDEGKGELFLSCIPRNHSCS 51

Human    97 EFRSLFGSIGEIESCKLVRDKI--TGQSLGYGFVNYIDPKDAEKAINTL---------------- 143
            . |.:.....|:....::|.||  :|.|.||.::.||:....|.|:..|                
  Fly    52 P-RWIVEVASELGEVYIMRYKIDFSGNSRGYAYLQYINVDLKESAMQYLPMRFRQLCMCLRVEPS 115

Human   144 -NGLRLQTKTIKVSYARPSSASIRDANLYVSGL---PKTMT---QKELEQLF 188
             |...|..|.::        :|:|...:|...|   |.|:.   :.:|:|.|
  Fly   116 TNNRELVLKNVE--------SSLRPWQVYQEMLKIHPFTIVRVYEYQLDQFF 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ELAVL4XP_011539191.1 ELAV_HUD_SF 79..415 CDD:273741 30/135 (22%)
tutNP_729346.1 RRM1_hnRNPR_like 36..115 CDD:240695 18/79 (23%)
DUF3388 <127..169 CDD:288701 9/41 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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