DRSC/TRiP Functional Genomics Resources

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Protein Alignment ELAVL3 and Rbp9

DIOPT Version :10

Sequence 1:NP_001411.2 Gene:ELAVL3 / 1995 HGNCID:3314 Length:367 Species:Homo sapiens
Sequence 2:NP_001259974.1 Gene:Rbp9 / 33498 FlyBaseID:FBgn0010263 Length:684 Species:Drosophila melanogaster


Alignment Length:358 Identity:205/358 - (57%)
Similarity:248/358 - (69%) Gaps:35/358 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    24 NGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYS 88
            |......|....|.|||||||||||.|:|||.:|||.|.|::|||||:|||:||||||||||||.
  Fly    95 NATANNNNNNEPDPKTNLIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYV 159

Human    89 DPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIIT 153
            ...||:||||.||||:||.||||||.|||||.||:.||||||||||.|:|.::|.|||.||:|||
  Fly   160 KQEDAEKAINALNGLRLQNKTIKVSIARPSSESIKGANLYVSGLPKNMTQSDLESLFSPYGKIIT 224

Human   154 SRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPS--QKTGQALLT 216
            ||||.|.:||:|:||||||||:|.||:.|||.|||..|..:.||||||||||||  :.:.|.|..
  Fly   225 SRILCDNITGLSKGVGFIRFDQRFEADRAIKELNGTTPKNSTEPITVKFANNPSSNKNSMQPLAA 289

Human   217 HLYQSSAR----------------RYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLIARFSPIAID 265
            ::...:.|                ..|..:|....|:.               |:|:|:||:..|
  Fly   290 YIAPQNTRGGRAFPANAAAGAAAAAAAAAIHPNAGRYS---------------SVISRYSPLTSD 339

Human   266 GMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIRDFTTNKCKGFGFV 330
            .::.  |:......|.:|||||||||:|:.:|:||||||||||||.:||||||..:|||||||||
  Fly   340 LITN--GMIQGNTIASSGWCIFVYNLAPDTEENVLWQLFGPFGAVQSVKVIRDLQSNKCKGFGFV 402

Human   331 TMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363
            |||||:||.:||.|||||.||.|||||||||:|
  Fly   403 TMTNYEEAVLAIQSLNGYTLGNRVLQVSFKTNK 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ELAVL3NP_001411.2 ELAV_HUD_SF 36..366 CDD:273741 203/346 (59%)
Rbp9NP_001259974.1 ELAV_HUD_SF 107..438 CDD:273741 203/346 (59%)

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