DRSC/TRiP Functional Genomics Resources

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Protein Alignment ELAVL3 and fne

DIOPT Version :10

Sequence 1:NP_001411.2 Gene:ELAVL3 / 1995 HGNCID:3314 Length:367 Species:Homo sapiens
Sequence 2:NP_001401058.1 Gene:fne / 32245 FlyBaseID:FBgn0086675 Length:371 Species:Drosophila melanogaster


Alignment Length:371 Identity:218/371 - (58%)
Similarity:263/371 - (70%) Gaps:44/371 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    24 NGPLLGT-NGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKIT----------- 76
            ||...|: :|:.|:|:||||||||||.|||:|.:|||.|||::|||||||||::           
  Fly    10 NGSANGSVDGSNDESRTNLIVNYLPQTMTQEEMRSLFSSIGELESCKLVRDKVSGNLVLPASLTA 74

Human    77 -------GQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGLPK 134
                   |||||||||||....||:||:||||||:||.|.||||||||||.||:.||||||||||
  Fly    75 LNPALQQGQSLGYGFVNYVRAEDAEKAVNTLNGLRLQNKVIKVSYARPSSESIKGANLYVSGLPK 139

Human   135 TMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPIT 199
            .:||.::|.:|:.:|:|||||||.|.::|:|:||||||||:|.|||.||:.|||:.|.|.|||||
  Fly   140 NLSQPDLEGMFASFGKIITSRILCDNISGLSKGVGFIRFDQRNEAERAIQELNGKTPKGYAEPIT 204

Human   200 VKFANNPSQKTG-------QALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSLI- 256
            ||||||||....       .|.||....::.||.||         .|.:...::.| |||:..| 
  Fly   205 VKFANNPSNSAKAQIAPPLTAYLTPQAAAATRRLAG---------ALPSAGRISIG-KSPMLAIN 259

Human   257 ---ARFSPIAIDGMSGLAGVGLSGGA-AGAGWCIFVYNLSPEADESVLWQLFGPFGAVTNVKVIR 317
               .|:||:|.|   .||...|.|.| .|:|||||||||:||.:|:||||||||||||.:|||||
  Fly   260 KGLQRYSPLAGD---LLANSILPGNAMTGSGWCIFVYNLAPETEENVLWQLFGPFGAVQSVKVIR 321

Human   318 DFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363
            |..|:||||||||||||||||.:||.|||||.||.|||||||||:|
  Fly   322 DLQTSKCKGFGFVTMTNYDEAVVAIQSLNGYTLGNRVLQVSFKTNK 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ELAVL3NP_001411.2 ELAV_HUD_SF 36..366 CDD:273741 213/358 (59%)
fneNP_001401058.1 ELAV_HUD_SF 23..369 CDD:273741 213/358 (59%)

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