DRSC/TRiP Functional Genomics Resources

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Protein Alignment ELAVL3 and ssx

DIOPT Version :10

Sequence 1:NP_001411.2 Gene:ELAVL3 / 1995 HGNCID:3314 Length:367 Species:Homo sapiens
Sequence 2:NP_569908.1 Gene:ssx / 31086 FlyBaseID:FBgn0024987 Length:485 Species:Drosophila melanogaster


Alignment Length:195 Identity:86/195 - (44%)
Similarity:121/195 - (62%) Gaps:0/195 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    37 SKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDKITGQSLGYGFVNYSDPNDADKAINTLN 101
            |.||||:|||||:||..|..:||...|.|.:||::||..||.|.|||||:|...:|::.||..||
  Fly    91 SATNLIINYLPQDMTDRELYNLFSGCGPINTCKIMRDFKTGYSFGYGFVDYKTESDSEDAIQKLN 155

Human   102 GLKLQTKTIKVSYARPSSASIRDANLYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSR 166
            |..::.|.:|||||||...||:|.||||..|.:.::...::::||.||.|:...||.|::||..|
  Fly   156 GFYVRNKRLKVSYARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPR 220

Human   167 GVGFIRFDKRIEAEEAIKGLNGQKPLGAAEPITVKFANNPSQKTGQALLTHLYQSSARRYAGPLH 231
            ||.|:|::||.||:||||.||...|.|.::||.|:.|....:......:..:...:.....||.|
  Fly   221 GVAFVRYNKREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGKAKAAQFMAQIGGGNGGGGGGPPH 285

Human   232  231
              Fly   286  285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ELAVL3NP_001411.2 ELAV_HUD_SF 36..366 CDD:273741 86/195 (44%)
ssxNP_569908.1 sex-lethal <76..272 CDD:273740 83/180 (46%)

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