DRSC/TRiP Functional Genomics Resources

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Protein Alignment ELAVL3 and elav

DIOPT Version :10

Sequence 1:NP_001411.2 Gene:ELAVL3 / 1995 HGNCID:3314 Length:367 Species:Homo sapiens
Sequence 2:NP_525033.1 Gene:elav / 31000 FlyBaseID:FBgn0260400 Length:483 Species:Drosophila melanogaster


Alignment Length:378 Identity:198/378 - (52%)
Similarity:249/378 - (65%) Gaps:57/378 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    16 GPAGPALPNGPLLGTNGATDDSKTNLIVNYLPQNMTQDEFKSLFGSIGDIESCKLVRDK------ 74
            |.||....|    |:||:| :::||||||||||.||:||.:|||.|:|:|||.||:|||      
  Fly   131 GNAGSGSQN----GSNGST-ETRTNLIVNYLPQTMTEDEIRSLFSSVGEIESVKLIRDKSQVYID 190

Human    75 -------ITGQSLGYGFVNYSDPNDADKAINTLNGLKLQTKTIKVSYARPSSASIRDANLYVSGL 132
                   ..|||||||||||..|.||::|:|.||||:||.||||||:|||||.:|:.||||||||
  Fly   191 PLNPQAPSKGQSLGYGFVNYVRPQDAEQAVNVLNGLRLQNKTIKVSFARPSSDAIKGANLYVSGL 255

Human   133 PKTMSQKEMEQLFSQYGRIITSRILVDQVTG---VSRGVGFIRFDKRIEAEEAIKGLNGQKPLGA 194
            ||||:|:|:|.:|:.:|.|||||||  |..|   .::||||||||||.||..||..|||..|...
  Fly   256 PKTMTQQELEAIFAPFGAIITSRIL--QNAGNDTQTKGVGFIRFDKREEATRAIIALNGTTPSSC 318

Human   195 AEPITVKFANNP---SQKTGQALLTHLYQSSARRYAGPLHHQTQRFRLDNLLNMAYGVKSPLSL- 255
            .:||.|||:|.|   |:.....|...|.....||..|.:|                   :|::. 
  Fly   319 TDPIVVKFSNTPGSTSKIIQPQLPAFLNPQLVRRIGGAMH-------------------TPVNKG 364

Human   256 IARFSPIAID----------GMSGLAGVGLSGGAAGAGWCIFVYNLSPEADESVLWQLFGPFGAV 310
            :|||||:|.|          |.:..|...|:.|..|| :.||:|||:||.:|:.|||||||||||
  Fly   365 LARFSPMAGDMLDVMLPNGLGAAAAAATTLASGPGGA-YPIFIYNLAPETEEAALWQLFGPFGAV 428

Human   311 TNVKVIRDFTTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGERVLQVSFKTSK 363
            .:||:::|.|||:|||:|||:|||||||||||.:||||.:|.|||||||||:|
  Fly   429 QSVKIVKDPTTNQCKGYGFVSMTNYDEAAMAIRALNGYTMGNRVLQVSFKTNK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ELAVL3NP_001411.2 ELAV_HUD_SF 36..366 CDD:273741 190/358 (53%)
elavNP_525033.1 ELAV_HUD_SF 146..483 CDD:273741 190/358 (53%)

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