DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ELAVL2 and Sxl

DIOPT Version :10

Sequence 1:XP_047278864.1 Gene:ELAVL2 / 1993 HGNCID:3313 Length:411 Species:Homo sapiens
Sequence 2:NP_001259303.1 Gene:Sxl / 3772180 FlyBaseID:FBgn0264270 Length:722 Species:Drosophila melanogaster


Alignment Length:289 Identity:108/289 - (37%)
Similarity:160/289 - (55%) Gaps:34/289 - (11%)


- Green bases have known domain annotations that are detailed below.


Human    58 NGPTCNNTANG----------PTTINNNCSSPVDSGNTED-------SKTNLIVNYLPQNMTQEE 105
            ||.:.||...|          ..::||.|...:.||.::|       |.||||||||||:||..|
  Fly    68 NGGSANNLGGGNMCHLPPMASNNSLNNLCGLSLGSGGSDDLMNDPRASNTNLIVNYLPQDMTDRE 132

Human   106 LKSLFGSIGEIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSS 170
            |.:||.:||.|.:|:::||..||.|.||.||::....|:::||..|||:.::.|.:|||||||..
  Fly   133 LYALFRAIGPINTCRIMRDYKTGYSFGYAFVDFTSEMDSQRAIKVLNGITVRNKRLKVSYARPGG 197

Human   171 ASIRDANLYVSGLPKTMTQKELEQLFSQYGRIITSRILVDQVTGISRGVGFIRFDKRIEAEEAIK 235
            .||:|.||||:.||:|:|..:|:.:|.:||.|:...||.|::||..|||.|:|::||.||:|||.
  Fly   198 ESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYNKREEAQEAIS 262

Human   236 GLNGQKPPGATEPITVKFANNPSQKTNQAILSQLYQSPNR---RYPGPLAQQAQRFRL------- 290
            .||...|.|.::|::|:.|....:......:||:...|..   ..|.|.|..|..|.:       
  Fly   263 ALNNVIPEGGSQPLSVRLAEEHGKAKAAHFMSQMGVVPANVPPPPPQPPAHMAAAFNMMHRDGAM 327

Human   291 -------DNLLNMAYGVKSRFSPMTIDGM 312
                   |.:.:..:|:.|......:||:
  Fly   328 EKLRSLFDAICDAIFGLDSENFADLLDGL 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ELAVL2XP_047278864.1 ELAV_HUD_SF 87..410 CDD:273741 98/250 (39%)
SxlNP_001259303.1 sex-lethal 16..297 CDD:273740 97/228 (43%)

Return to query results.
Submit another query.