Protein Alignment ND1 and ndhA

DIOPT Version :10

• Sequence 1: YP_009047278.1
• Gene: ND1 / 19893558
• FlyBaseID: FBgn0013679
• Length: 312
• Species: Drosophila melanogaster
• Sequence 2: NP_051114.1
• Gene: ndhA / 844804
• -ID: -
• Length: 360
• Species: Arabidopsis thaliana
• Alignment Length: 330
• Identity: 107/330 - (32%)
• Similarity: 161/330 - (48%)
• Gaps: 36/330 - (10%)

  Fly    13 LIICVLVSVAFLTLLERKVLGYIQIRKGPNKVGLMGIPQPFCDAIKLFTKEQTYPLLSNYLSYYI 77
            |::.::..|..:..|||::...||.|.||...|.:||.|...|..||..||...|...|...:.|
plant    36 LVLGIITGVLVIVWLEREISAGIQQRIGPEYAGPLGILQALADGTKLLFKENLRPSRGNTPLFSI 100

  Fly    78 SPIFSLFLSLFVWMCMPF--FVKLYSFNLGGLFFLCCTSLGVYTVMVAGWSSNSNYALLGGLRAV 140
            .|..::...|..:..:||  .:.|...|:|...::..:|:....::::|:.||:.|:.||||||.
plant   101 GPSIAVISILLSYSVIPFSNHLVLADLNIGIFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAA 165

  Fly   141 AQTISYEVSLALILLSFIFLIGSYNMI-------YFFFYQVYMWFLIILFPMALVWMSISLAETN 198
            ||:||||:.|.|.:||...|..|.:.:       .:.|:...:|...|.|   ::::..||||..
plant   166 AQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKYGFWGWNLWRQPIGF---IIFLISSLAECE 227

  Fly   199 RTPFDFAEGESELVSGFNVEYSSGGFALIFMAEYASILFMSMLFCVIFLG-----------CDVF 252
            |.|||..|.|.||::|:..|||...|.|.::|.|.::|..|:...|::||           .::|
plant   228 RLPFDLPEAEEELIAGYQTEYSGIKFGLFYVASYLNLLISSLFVTVLYLGGWNISIPYISILELF 292

  Fly   253 N-----------LLFYMKLTFISFVFIWVRGTLPRFRYDKLMYLAWKCFLSFSLNYLLFFIGFKI 306
            .           .:...|.....||.|..|.||||.|.|:|:.|.||..|..||..||....|:
plant   293 QRDQIFGTTIGIFITLAKTYLFLFVSIATRWTLPRLRMDQLLNLGWKFLLPISLGNLLLTTSFQ- 356

  Fly   307 LLFSL 311
             ||||
plant   357 -LFSL 360

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ND1	YP_009047278.1	ND1	16..308	CDD:177241	102/322 (32%)
ndhA	NP_051114.1	ndhA	1..360	CDD:214341	105/328 (32%)