DRSC/TRiP Functional Genomics Resources

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Protein Alignment CYTB and BI2

DIOPT Version :9

Sequence 1:YP_009047277.1 Gene:CYTB / 19893556 FlyBaseID:FBgn0013678 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_009318.1 Gene:BI2 / 854604 SGDID:S000007271 Length:423 Species:Saccharomyces cerevisiae


Alignment Length:413 Identity:127/413 - (30%)
Similarity:204/413 - (49%) Gaps:72/413 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNHI 70
            |.|:....:.|:.::|.|.|.:|:.|||.||||||||:|||:||:|:||||:::|.|||.||.||
Yeast     4 RKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHI 68

  Fly    71 CRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVMGTAFMGY 132
            .|||:.|::||.||||||||||:.:::|:.:|:|||||: :|   .|.:||||..|.:.|||:||
Yeast    69 MRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYR-SPRVTLWNVGVIIFILTIATAFLGY 132

  Fly   133 VLPWGQMSFWG----ATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHF-ILPFIVLA 192
            ...:||||.||    |:.:.|::..|..:.:.|:.:::....:.....|:.:|... .:.:|...
Yeast   133 CCVYGQMSHWGNMNIASNMFNMMKTIYMMMLMLLIYIFYTIMMRQMMKTKEYTMLIKSMDYINKN 197

  Fly   193 MTMIHLLFLHQTGSNNPIG-LNSNIDKIPFHPY----------------FTFKDIVGFIVMIFIL 240
            ..||:|...::...||.|| ||.||..|.:...                ..|:.....|..::.|
Yeast   198 KYMINLNMTNKKDMNNNIGPLNMNILSIIYGSMLGDGHAEKRKGGKGTRIVFQQEYCNINYLYYL 262

  Fly   241 ISLV-----------LISPNL--LGDPDNFIPANPLVTPAH--IQPEWYF--LFAYAILRSIPNK 288
            .||:           ||...|  .|....::..|.....:.  |..|||.  :.....::.||..
Yeast   263 HSLLANLGYCNTNLPLIKTRLGKKGKIRQYLKFNTWTYDSFNMIYSEWYIKNMSGKGNIKVIPKS 327

  Fly   289 LGGVIALVLSIAILMILPFYNLSKFRGIQF----YPINQVMFWSMLV--------TV-------- 333
            |...:. .|::||.::.....|.|  |::|    :....|.:.:.|:        |:        
Yeast   328 LDNYLT-PLALAIWIMDDGCKLGK--GLKFTTNCFSYKDVQYLTYLLHNKYNIKSTITKGNKENT 389

  Fly   334 --ILLTWIGARP----VEEPYVL 350
              ::..|..:.|    :..||::
Yeast   390 QFVIYVWKESMPILTKIVSPYII 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYTBYP_009047277.1 CYTB 12..367 CDD:214440 125/407 (31%)
BI2NP_009318.1 CYTB 3..>143 CDD:177239 75/139 (54%)
LAGLIDADG_2 223..403 CDD:397327 30/182 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157346803
Domainoid 1 1.000 248 1.000 Domainoid score I350
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19271
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1779
TreeFam 00.000 Not matched by this tool.
54.940

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