DRSC/TRiP Functional Genomics Resources

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Protein Alignment CYTB and BI4

DIOPT Version :10

Sequence 1:YP_009047277.1 Gene:CYTB / 19893556 FlyBaseID:FBgn0013678 Length:378 Species:Drosophila melanogaster
Sequence 2:NP_009316.1 Gene:BI4 / 854582 SGDID:S000007273 Length:638 Species:Saccharomyces cerevisiae


Alignment Length:250 Identity:137/250 - (54%)
Similarity:187/250 - (74%) Gaps:4/250 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 RNSHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNHI 70
            |.|:....:.|:.::|.|.|.:|:.|||.||||||||:|||:||:|:||||:::|.|||.||.||
Yeast     4 RKSNVYLSLVNSYIIDSPQPSSINYWWNMGSLLGLCLVIQIVTGIFMAMHYSSNIELAFSSVEHI 68

  Fly    71 CRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVMGTAFMGY 132
            .|||:.|::||.||||||||||:.:::|:.:|:|||||: :|   .|.:||||..|.:.|||:||
Yeast    69 MRDVHNGYILRYLHANGASFFFMVMFMHMAKGLYYGSYR-SPRVTLWNVGVIIFILTIATAFLGY 132

  Fly   133 VLPWGQMSFWGATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIVLAMTMIH 197
            ...:||||.|||||||||.||||::|.|:|.||||||:|.|.|:.|||..|:::|||:.||.::|
Yeast   133 CCVYGQMSHWGATVITNLFSAIPFVGNDIVSWLWGGFSVSNPTIQRFFALHYLVPFIIAAMVIMH 197

  Fly   198 LLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFILISLVLISPNLLG 252
            |:.||..||:||:|:..|:|:||.|.||.|||:|...:.:.||...|..|||.||
Yeast   198 LMALHIHGSSNPLGITGNLDRIPMHSYFIFKDLVTVFLFMLILALFVFYSPNTLG 252

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CYTBYP_009047277.1 CYTB 12..367 CDD:214440 134/243 (55%)
BI4NP_009316.1 CYTB 10..>252 CDD:214440 133/242 (55%)
LAGLIDADG_1 408..495 CDD:395767
Blue background indicates that the domain is not in the aligned region.

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