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Protein Alignment CYTB and petB
DIOPT Version :9
Sequence 1: | YP_009047277.1 |
Gene: | CYTB / 19893556 |
FlyBaseID: | FBgn0013678 |
Length: | 378 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_051088.1 |
Gene: | petB / 844729 |
-ID: | - |
Length: | 215 |
Species: | Arabidopsis thaliana |
Alignment Length: | 193 |
Identity: | 64/193 - (33%) |
Similarity: | 106/193 - (54%) |
Gaps: | 7/193 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 LPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLAFYSVNHICRDVNYGWLLRTLHAN 86
:|..:|| ::..|.:...|.::|:.||..:..:|...:..||.||.:|..:.|:|||:|::|..
plant 26 VPPHVNI--FYCLGGITLTCFLVQVATGFAMTFYYRPTVTEAFASVQYIMTEANFGWLIRSVHRW 88
Fly 87 GASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVMGTAFMGYVLPWGQMSFWGATVIT 148
.||...:.:.|||.|....|.:| .| ||:.||::..|.......||.|||.|:.:|...::|
plant 89 SASMMVLMMILHVFRVYLTGGFK-KPRELTWVTGVVLGVLTASFGVTGYSLPWDQIGYWAVKIVT 152
Fly 149 NLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFH-FILPFIVLAMTMIHLLFLHQTGSNNPI 210
.:..|||.:|..||:.|.|..:|..:|||||::.| |:||.:.....::|.|.:.:.|.:.|:
plant 153 GVPDAIPVIGSPLVELLRGSASVGQSTLTRFYSLHTFVLPLLTAVFMLMHFLMIRKQGISGPL 215
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CYTB | YP_009047277.1 |
CYTB |
12..367 |
CDD:214440 |
64/193 (33%) |
petB | NP_051088.1 |
petB |
1..215 |
CDD:177009 |
63/191 (33%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1125966at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_102198 |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.820 |
|
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