DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CYTB and AT2G07727

DIOPT Version :9

Sequence 1:	YP_009047277.1	Gene:	CYTB / 19893556	FlyBaseID:	FBgn0013678	Length:	378	Species:	Drosophila melanogaster
Sequence 2:	NP_178804.1	Gene:	AT2G07727 / 815400	AraportID:	AT2G07727	Length:	393	Species:	Arabidopsis thaliana

Alignment Length:	374	Identity:	204/374 - (54%)
Similarity:	265/374 - (70%)	Gaps:	10/374 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly     5 LRN------SHPLFKIANNALVDLPAPINISSWWNFGSLLGLCLIIQILTGLFLAMHYTADINLA 63
            :||      ..|:....|..|||.|.|.|:|.||.||.|.|:||:|||:||:|||||||..::||
plant     3 IRNQRFSLLKQPISSTLNQHLVDYPTPSNLSYWWGFGPLAGICLVIQIVTGVFLAMHYTPHVDLA 67

  Fly    64 FYSVNHICRDVNYGWLLRTLHANGASFFFICIYLHVGRGIYYGSYKFTP---TWLIGVIILFLVM 125
            |.||.||.|||..|||||.:||||||.|.|.:|||:.||:|:.||. :|   .|.:||:|..|::
plant    68 FNSVEHIMRDVEGGWLLRYMHANGASMFLIVVYLHIFRGLYHASYS-SPREFVWCLGVVIFLLMI 131

  Fly   126 GTAFMGYVLPWGQMSFWGATVITNLLSAIPYLGMDLVQWLWGGFAVDNATLTRFFTFHFILPFIV 190
            .|||:||||||||||||||||||:|.||||.:|..:|.||||||:||||||.|||:.|.:||||:
plant   132 VTAFIGYVLPWGQMSFWGATVITSLASAIPVVGDTIVTWLWGGFSVDNATLNRFFSLHHLLPFIL 196

  Fly   191 LAMTMIHLLFLHQTGSNNPIGLNSNIDKIPFHPYFTFKDIVGFIVMIFILISLVLISPNLLGDPD 255
            :..:::||..|||.|||||:|::|.:|||.|:|||..||:||::.........:..:||:||.||
plant   197 VGASLLHLAALHQYGSNNPLGVHSEMDKIAFYPYFYVKDLVGWVAFAIFFSIWIFYAPNVLGHPD 261

  Fly   256 NFIPANPLVTPAHIQPEWYFLFAYAILRSIPNKLGGVIALVLSIAILMILPFYNLSKFRGIQFYP 320
            |:|||||:.||.||.||||||..:|||||||:|.|||.|:......|:.|||:.....|...|.|
plant   262 NYIPANPMSTPPHIVPEWYFLPIHAILRSIPDKAGGVAAIAPVFICLLALPFFKSMYVRSSSFRP 326

  Fly   321 INQVMFWSMLVTVILLTWIGARPVEEPYVLIGQILTVVYFLYYLVNPLI 369
            |:|.|||.:|...:||.|||.:|||.|:|.||||..:|:||::.:.|::
plant   327 IHQGMFWLLLADCLLLGWIGCQPVEAPFVTIGQISPLVFFLFFAITPIL 375

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CYTB	YP_009047277.1	CYTB	12..367	CDD:214440	200/357 (56%)
AT2G07727	NP_178804.1	CYTB	19..373	CDD:214440	200/354 (56%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	1	1.000	259	1.000	Domainoid score	I488
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	445	1.000	Inparanoid score	I400
OMA	1	1.010	-	-		QHG60605
OrthoDB	1	1.010	-	-		D1125966at2759
OrthoFinder	1	1.000	-	-		FOG0004155
OrthoInspector	1	1.000	-	-		oto3241
orthoMCL	1	0.900	-	-		OOG6_102198
Panther	1	1.100	-	-	LDO	PTHR19271
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X1779
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	11	10.980