Protein Alignment ND5 and ndhF

DIOPT Version :10

• Sequence 1: YP_009047273.1
• Gene: ND5 / 19893549
• FlyBaseID: FBgn0013684
• Length: 572
• Species: Drosophila melanogaster
• Sequence 2: NP_051106.1
• Gene: ndhF / 844705
• -ID: -
• Length: 746
• Species: Arabidopsis thaliana
• Alignment Length: 715
• Identity: 203/715 - (28%)
• Similarity: 314/715 - (43%)
• Gaps: 175/715 - (24%)

  Fly    14 LSCFLLSLYFLLNDMIY------FIE------WELVSLNSMSIVMTFLFDWMSLLFMSFVLMISS 66
            ||.||||:..:.:  ||      |:.      |.....|..|....:..|.::.:....:..:..
plant    43 LSIFLLSIVMIFS--IYLSIQQIFLSCIHQNVWSWTINNEFSFEFGYFIDPLTSIMSILITTVGI 105

  Fly    67 LVIFYSKEYMMNDNHINRFIMLVLMFVLSMMLLIISPNLISILLGWDGLGLVSYCLV-IYFQNIK 130
            ||:.||..||.:|....||...:..|..||:.|:.|.|||.:...|:.:|:.||.|: .:|....
plant   106 LVLIYSDNYMSHDQGYLRFFAYMGFFNTSMLGLVTSSNLIQVYFFWELVGMCSYLLIGFWFTRPI 170

  Fly   131 SYNAGMLTALSNRIGDVALLLSIA---WMLNYGSWNY-----IFYLEIMQNEFEMLMI---GSLV 184
            :.||.....::||:||..|||.|.   |:.  ||:.:     ||...|:.|...:|.:   ..|:
plant   171 AANACQKAFVTNRVGDFGLLLGILGLYWIT--GSFEFQDLFEIFNNLILNNRVNLLFLTLCAFLL 233

  Fly   185 MLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRF--------NIILSTSWLG 241
            .:..:.||||.|...|||.||..|||:|||:|::|:|.||::|:.|.        :|:...|.:|
plant   234 FVGPIAKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGIFLVARLLPLFIVIPSIMYIISLIG 298

  Fly   242 QLMLLLSGLTMFMAGLGANFEFDLKKIIALSTLSQLGLMMSILSMGFLKLAMFHLLTHALFKALL 306
            .:.:|| |.|:.:|      :.|:|:.:|.||:||||.||..|.||..:.|:|||:|||..||||
plant   299 IITVLL-GATLALA------QKDIKRGLAYSTMSQLGYMMLALGMGSYRSALFHLITHAYSKALL 356

  Fly   307 FMCAGAIIHNM--------NNSQDIRLMGGLSIHMPLTSACFNVSNLALCGMPFLAGFYSKDMIL 363
            |:.:|:|||:|        :.||::.|||||:.|:|:|...|.:..|:|||:|.||.|:|||.||
plant   357 FLGSGSIIHSMEAIVGYSPDKSQNMILMGGLTKHVPITKTAFLIGTLSLCGIPPLACFWSKDEIL 421

  Fly   364 EIVSISNVNMFS--FFLYYFST-GLTVSYSFRLVYYSMTGDLNCGSLNMLNDESWIMLR------ 419
                 ::..:||  |.:...|| |||..|.||:...:..|.||...||....:|.....
plant   422 -----NDSLLFSPIFAIIACSTAGLTAFYMFRIYLLTFEGHLNTYFLNYSGKKSGSFYSLSLWGK 481

  Fly   420 ----------GMMGLLIMS-------------------------IIGGSMLNWLIFPFPY----M 445
                      |::.||.|:                         .:....||...|.:|:    .
plant   482 EEEKKLNKNFGLVPLLTMNNTKRASFFCNKTYKISNNVRNQIFITVENFGLNTRTFYYPHESDNT 546

  Fly   446 ICLP-IYMKLLTLFVCIVGGLFG-----------YLISLSNLFFLNKSLFMYNLSTFLGSMWFMP 498
            |..| :.:.|.|||:..:|..|.           :.....||...|...|: :...||.:..|..
plant   547 ILFPMLILVLFTLFIGAIGIPFNQEGIDFDILSKFFTPSINLLHKNSQNFV-DWYEFLRNATFSV 610

  Fly   499 YISTYGMI--------FYPLNYGQLVVKSFDQ----------------GWSEYFGG--------- 530
            .|:.:|:.        ||.......::.||.:                .|| |..|
plant   611 SIAFFGIFIAYCLYKPFYSSLLNLTLLNSFQKWNSKRIHWEKLINFVYNWS-YNRGYIDSFFKTS 674

  Fly   531 -----QHLYQKLSMYSKTLFLMHNNSLKI-------------------YLLLFVFWILILLILLF 571
                 :.|.::.:.:.|.:.....|.:.|                   ||.|::.::||.|::||
plant   675 LIESIRRLAKQTTFFDKRIIDGITNGVGITSFFVGEVTKYIGGSRISSYLFLYLSYVLIFLMILF 739

  Fly   572  571
            plant   740  739

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
ND5	YP_009047273.1	ND5	1..562	CDD:214444	198/704 (28%)
ndhF	NP_051106.1	ndhF	1..743	CDD:214338	203/715 (28%)